LOC110512348 (LOC100135993)


Basic Information

Item Value
gene id LOC110512348
gene name LOC100135993
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61395693 ~ 61399289 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960953.1
ATGGCATTACTTCACATCCTGTACAAAGACACACTGTTGGCATATCGTTTGGTACTGACTATTCAACTCACACTCTCTCTAATGAGGTTTCCCAGTAAGACGTTCTGATATTGTTGGAAAAGTGCAGCTAATACAGGATTACAGGACATCATGGACATGACTCCCACCCCCAGCTCTGGTAATAGTAATCTGAATGAAGCCAACAATTGTGGAGTGGACCTCAGCCAAGATGCCATCTACCTTCCTgtaatctacagtatattcttCATCATTGGCACTCCCCTCAATCTGATGGCCCTGTTCGGGCTCTATCGTCTGATCAAGTCTGAAAACGTCTTACCGGTGTACGTGATCAACCTGCTCCTTTCGGATCTCCTCCAACTGTTCACTGTACCTCTATGGATTGACTACTATCGCAGGGGTCACAGCTGGCGATTCGGGTCCACTTCCTGCCAGTTATTGGGAGTCAGTTTCTACATCAGCATTTACACCGGTATTGCCTTCATGTGCATCATCGCTTTGGAGCGCTACTTGGCCATCGCCAAGCCTCTGAGATTCCAAGCATTGAGAAAGCTGAAGTTTGCACGATGGATAGCCCTTAGCATATGGGTCGTGGTAGCCGTGCCTCCATCCATCGTCTTGCATAAAATGCAACCCAACGACAATCACACCCTGTGTATCGAGAGCTACCCTTCCAAGGAGGGGTTCATCATCTACCGATTGATCACCTTATCCCTGTCCTTCATCATCCCTCTCGCCTTCATCGTGATCCTCCACCGGAAGACCCTGAGGTCTTTGTCAGCCATTGGTACcttgggaagggaagagaagcaCCGCATCAGGGGGCTTCTCATTCTGCTGATGGTCATCTTCATCCTGGTCCTCGGCCCCTACCACATCACAGGATGCGTGAAGTACATTGGATTGCTTCTCCACGGTGACGCCTGTGAGTGGGAGAAGACAGTGTTTGTGCCCTACCAGCTGGGCAGGGGTTTGCTGAGCCTCAACAGTGTGCTGGACCCTATACTTTATACGTTCCTGAGGAGTGACTTCAGGGCGGCTGCGGGCCATTACCTGCCCTGCCTGAGGAGAATGCAGGAGTCTGTATGCAGGACTGTGAGTCATCAGAGGACCAACACTAAGACCCCTAGTACTCTCTCAGATCACTCTGATTCTATCTAAACCCAAACCAGACATTTGTAACATACATGTACAGGATGTACAGTACCTAGCTAGATGCTATCTGCTTGTATTATAATGTAATAACCAGATTTAGAAAAATCACCAGGACCACTATTATCCTTGGAGACCCCACAGGGAGACCCTGATTCAACCTGTGATAAACATTAATACTGAACATTATTCATAAATGCTGCAGAACAAAGGTTATACTGTGGGAAAGGAACATCTCCAAGATATACATATATTTCagattattattctttttttttacaaaaactgTTTGTTTCTTTAAACAGTGCCAGTGGGTTTTGGAAAGTACATTCTTGATTGAGACAGACGTGGTTTGCCTCATATTGCCACAGCCAGGAAGTTGCCAGATTTCATGTGGCAGGCAGCTGGTCTCGCAGAAGGACTGGTGTCCTCATAATAAATTCATATTTCCTCTTTCAAGCACCAAACTATTTCACAAAAAGGAACTTGCCTAGAAACACATCTTGTTCCAAATCAATTGGAAGTTGTTTTACAAACTTGTTTTACAACTTTGTTGAATCAAACTTACAAACTAGACCTGAAACATATAAGATAAACTGCTGAAGGACTGAACATAGTTGTAATCCTTGGTTGTCCGCAAAAGTGTATATCTGACactggggagaaaaaaaa

Function

NR:

description
G-protein coupled receptor 4-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960953.1 True 1845 mRNA 0.45 2 61395693 61399289

Neighbor

gene id symbol gene type direction distance location
adgrb3 adgrb3 coding downstream 121076 60939373 ~ 61274617 (-)
LOC110515674 col19a1 coding downstream 762399 60371446 ~ 60633294 (-)
LOC110514479 LOC106594326 coding downstream 1074851 60266566 ~ 60320842 (-)
LOC118936588 LOC106613623 coding downstream 1132419 60232501 ~ 60263274 (-)
tarbp1 tarbp1 coding downstream 1170525 60186226 ~ 60225168 (-)
LOC118943930 LOC106577366 coding upstream 591799 61991088 ~ 62010652 (-)
slc1a4 slc1a4 coding upstream 620139 62019428 ~ 62062283 (-)
LOC118943932 NA coding upstream 635688 62034977 ~ 62038662 (-)
LOC118943934 LOC106592896 coding upstream 720641 62119930 ~ 62147728 (-)
LOC118943840 NA coding upstream 754616 62152136 ~ 62164324 (-)
G1887929 NA non-coding downstream 29628 61365809 ~ 61366065 (-)
G1887926 NA non-coding downstream 31178 61364300 ~ 61364515 (-)
G1887917 NA non-coding downstream 46162 61343509 ~ 61349531 (-)
G1887852 NA non-coding downstream 107712 61287740 ~ 61287981 (-)
G1887839 NA non-coding downstream 116602 61278723 ~ 61279091 (-)
G1887980 NA non-coding upstream 24377 61423666 ~ 61424290 (-)
G1887984 NA non-coding upstream 27195 61426484 ~ 61426720 (-)
G1888056 NA non-coding upstream 113585 61512874 ~ 61513163 (-)
G1888104 NA non-coding upstream 160761 61560050 ~ 61560681 (-)
G1888557 NA non-coding upstream 190413 61589702 ~ 61590671 (-)
G1887761 NA other downstream 244523 61150056 ~ 61151170 (-)
G1887449 NA other downstream 569903 60774110 ~ 60825790 (-)
G1886838 NA other downstream 1398630 59995384 ~ 59997063 (-)
G1886825 NA other downstream 1429027 59966362 ~ 59966666 (-)
gpr75 gpr75 other downstream 2043823 59346393 ~ 59351909 (-)
G1888836 LOC106562881 other upstream 861548 62260837 ~ 62267505 (-)
LOC110532867 LOC106562881 other upstream 870333 62258118 ~ 62273944 (-)

Expression


Co-expression Network