XLOC_037453 (gcgb)


Basic Information

Item Value
gene id XLOC_037453
gene name gcgb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 51265283 ~ 51271597 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073661
GACCATGAAACCGCACTGGGAGCCAAGAAAAGAGAAAACCAGCGAGACGACATTAAAATCCTCCACTTTATCTCTCCGCCACGACCCGACACAAACCAGGTAAGATGATGGTAAGGATCTATGCTTTCATTGGACTTTTACTTCTCATCCTGATCCAGAGCAGCCTGCAGATCCCCTTACAAGACACGGAGGAAAACGGCAGCCTTATGTCTGAAGACGTGCTATTTAATGACCCAAGAGAAGTAAACACCATGAAGAGACATTCAGAAGGCACTTTCTCAAATGACTACAGCAAATATCTGGAGACCAGGAGAGCACAAGACTTTGTTCAGTGGTTAATGAACTCTAAGAGGAGTGGAGTCCCGACACGACGACATGCAGACGGCACATACACCAGTGATGTCAGCTCGTACCTGCAGGACCAGGCAGCAAAAGAGTTTGTGTCCTGGCTAAAAACAGGACGAGGACGACGCGAGTGAGGATTCTTCAGACCCAAATATGAACTACCATGCATAACTGTGATATTGGACAATATGCTGTTTTATAATGACCAGTGCTGTATGAATCATGCAAATAAACCTTTCTTCAAATG

Function

symbol description
gcgb Predicted to enable glucagon receptor binding activity. Predicted to be involved in response to starvation. Predicted to be located in extracellular region. Is expressed in glucagon secreting cell. Human ortholog(s) of this gene implicated in Alzheimer's disease and prediabetes syndrome. Orthologous to human GCG (glucagon).

GO:

id name namespace
GO:0042594 response to starvation biological_process
GO:0005576 extracellular region cellular_component
GO:0031769 glucagon receptor binding molecular_function
GO:0005179 hormone activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040712-2 Predicted to enable glucagon receptor binding activity. Predicted to be involved in response to starvation. Predicted to be located in extracellular region. Is expressed in glucagon secreting cell. Human ortholog(s) of this gene implicated in Alzheimer's disease and prediabetes syndrome. Orthologous to human GCG (glucagon).

Ensembl:

ensembl_id ENSDARG00000040907

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073661 True 592 mRNA 0.45 4 51265283 51271597

Neighbor

gene id symbol gene type direction distance location
XLOC_037452 fap coding upstream 3944 51225345 ~ 51261339 (+)
XLOC_037451 ifih1 coding upstream 47887 51147380 ~ 51217396 (+)
XLOC_037450 NA coding upstream 124162 51137336 ~ 51141121 (+)
XLOC_037449 NA coding upstream 132105 51109789 ~ 51133178 (+)
XLOC_037448 CABZ01079853.1 coding upstream 204322 51043455 ~ 51060961 (+)
XLOC_037454 rbms1b coding downstream 384039 51655636 ~ 51755758 (+)
XLOC_037455 NA coding downstream 493937 51765534 ~ 51775942 (+)
XLOC_037456 cd302 coding downstream 513325 51784922 ~ 51804828 (+)
XLOC_037457 CABZ01079550.1 coding downstream 610937 51882534 ~ 51884024 (+)
XLOC_037458 NA coding downstream 684428 51956025 ~ 51957617 (+)
XLOC_037447 NA non-coding upstream 324430 50940357 ~ 50940853 (+)
XLOC_037446 CABZ01053739.1 non-coding upstream 464810 50800357 ~ 50800473 (+)
XLOC_037459 NA non-coding downstream 690888 51962485 ~ 52006435 (+)
XLOC_037460 CABZ01028277.1 non-coding downstream 810714 52082311 ~ 52082437 (+)
XLOC_037461 NA non-coding downstream 1114943 52386540 ~ 52402421 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000108_00733178_00735007 GCGB, GCG coding CI01000108 null 733178 ~ 735109 (+)