XLOC_037454 (rbms1b)


Basic Information

Item Value
gene id XLOC_037454
gene name rbms1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 51655636 ~ 51755758 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073662
atgtaattaaaAAAGTTTTAGGGAAACTTGTGTTCATTTGTTCTGAAAAtaatttcaatgcaaaaaaaaaaactttataggtCCTGAAAGGGTTgcattttgtgctttaaaaaagtcTTTCCCTTCTTTAAGGGGTTAACTGTGACCTGAACATGTTTTGGTGAGATTTACTCCTACTACACCCATAGAAGAGAGAGTCAGTTTACTGTAGCTCTTCCTGTTGTTAGATAACAGCCACACATGCATCTTTTTAGCACACATCTATATCACTGGCATTGATGTTTACCCTCTTTACACACAGTTTTTATCTCTTcactttaaacacattttaaatctcACCATATAGCACATATGAAATTGTAAAACCACAAAAACCTGATGGCCTCACTCAGGAATGTGAAGTATTTGAGCCAAAGGAAACCAACAGCTGTCAACGGGGGGTTGACGAAACGTCAAAAACAATTACTCCAAAACTGCAGTGTTTTATAAAGCACAAACCGCGTGTAAATTCATGCATGTTTGCGCAACATGCATTATTCATTATCATATGGGCATAGAGTCAGTTTATGTTTAAGTGTTGTTTATACGCGCTCCCGACCCCCCTCTGAAAGGAGCGCAGTGGTTTCTTCCATAGTGGGAGGAGTAGTTTTGTGGAGAAGTCACCGCAGATCAATGAACTGAGCGGAACAGACGGGCTGGGCAAGCCGACTATATCTGTGGGATTTGTGCTGCTTtcctttaatattatattattatttggcACTCGTTACTATTCTGTCTGAAACAAGCCTCAAAGAGAGACTCTTAATGACAGCCTTGGTCCGTCATTGTGGTTTGTAGAGCCACACATACAACTTTGTCCTCCTGGATACACAAGATAACACACGACAGAAACATTTACTACTAAATAACACACTCGTTTGTGGATTTTGCGATTATTCAGGATGATTTTTGCCAATTCTGGACACACCTTAAGGACGTCGCATAATCGTAAGCAGCCACCTGTTGGCCCCGCCTCCCATCCGATGGCTCCGCCCAGTCCTGGAACCAACAGCAGCACTAatcacagcagcagcagcagcagcacagccGGCTGGGAGCAGCTCAGTAAAACCAACCTGTACATCCGCGGGTTACTGCCATCCACCACTGACCATGACCTGGTCAAACTCTGCCAGCCGTATGGAAAAATTGTATCAACCAAGGCCATCTTAGACAAAACCACAAACAAATGCAAAGGTTACGGTTTCGTGGATTTCGACAGTCCTGCAGCGGCTCAAAAAGCAGTCAGTGCTCTGAAGACCAGCGGCGTTCAGGCCCAGATGGccaagCAACAAGAGCAGGACCCGACTAACCTGTACATCTCTAACCTGCCGTTAACCATGGATGAGCAGGAGTTGGAGGCCATGCTGAAGCCCTTCGGTCAGGTCGTCTCCACACGAATACTCCGAGACACCAACGGGGCCAGTCGAGGGGTCGGATTCGCAAGGATGGAGTCAACAGAGAAATGTGAAGCCGTCATCTCTCACTTCAATGGGAAGTTCCTCAAAACACCAGCTGGAGTTATGGGTAAGTTCATGTCTGAGTGAACTTTAATAATCATCTACTTTAATAGAATCGTTTGCAAAGTctttgtgtttccatccaaaattgGGCTCCAAACTTATGAGACTGACTATTAGGGCTGCAAAATTTACATCTGATATagctacactcaccggccactttattaagtacaccttatggtatcaggttggacccacttttgccttcagaactgccttaatccttcatagcatcggttcaacaaggtactggagatattcctctgagattttgctccatattgacttgatagcaacacacagttgctgcagatttgtcggctgcacatccatgtctCCTGTtgcaccacatctcaaaggtgcgtgttatcctgctggaagtagacatcagaagatgagtacactgtggtcataaacggatggacatggtcagcaacaatactcaggtaggctgtggcgttgacatgatgctcaattggtactaatggacccaaagtgtgccaagaaaatctccccacaccattacaccaccaccaccaacctgaaccgttgatacaagtcAGGATGGATCCAAGCTTTCATGCTGTTAAAATATTTACCCTACCatttgaatgttgcagcagaaatggagactcatcagaccagacaacgtttccccaatcttttattgtccatttttggtgagcctgtgtgaattgtagcctcagtttcctgttcttaccaACAACCaggccacgttcaaagtcacttaaatcccctttcttccccattctgatgctcggtttgaactgcagcagatcgtcttgaccatgtctacatgcctaaatgcattgagttgctgccatgtaattggctgattagaaatgtgttactagctgttggacaggtgtacctaataaagtggccggtgagtgtaaacatCAGTTATGTTGCTTAGGTAAGATCAAAAAGTCTCCAGAACATCCtgagatgtgactattgtggtTGCTCACATTTGCAGTATTGTAAGATGCAGGTCTCTGCAcagattgtgattggccgagggAATACATGTCATCACAGGAGTGATTTGATTAGCAGTCGTGTCAGCCTATAGTGTTCCGAATGTAGGCGGTACCTAAATGTGAAGGTGACAGGGAGAAAAAGAGAGGTAGAAAGAGCATACTCACACAAACAGCAGTGTACGCTTCTTAACaagtataaaataaagaaatgtagTCTTTAAAATACAAAGACCAACAATACCAAATGGAGCAGTGCCGTTTTAAATAGTGTGTACTTTTAGTATAAACACTGTAAATGGTGACAGAAGTGTTCATTTGGGGTGAACCACTCAGTGAATGTGTGCTTCAACTCAGTTTGTGTGCATAAAAAGCTCTGCTGCTGTGTTAaagcccattcattcattcattcattcattcattcattcattcattcattcattcattcatgtcttCTCTGGTAATGATTCTCCTCATATGGGCTGTAAATGGAAACAGGCTTTCGGGCATGTGGCGCAGCCGTTCAGCCGTACTAAACAGCTTTCGCATGAATGTAGATTCAGACTTGCTGGATGAAATGCTGACTGAACTCATGCAAAGCTGGAGTGTCTGATAGATGTAATGCAGCAGTGAGGGCTGTTCAGTCATTcatgaatttattcatttattctttttattgCAGTACAGTTCACACTGAAACAAAATAAGATGCcgtttatatttgtgtttttttatcg

Function

symbol description
rbms1b Predicted to enable RNA binding activity. Predicted to be part of ribonucleoprotein complex.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103823

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073662 True 3303 mRNA 0.43 6 51655636 51755758

Neighbor

gene id symbol gene type direction distance location
XLOC_037453 gcgb coding upstream 384039 51265283 ~ 51271597 (+)
XLOC_037452 fap coding upstream 394297 51225345 ~ 51261339 (+)
XLOC_037451 ifih1 coding upstream 438240 51147380 ~ 51217396 (+)
XLOC_037450 NA coding upstream 514515 51137336 ~ 51141121 (+)
XLOC_037449 NA coding upstream 522458 51109789 ~ 51133178 (+)
XLOC_037455 NA coding downstream 9776 51765534 ~ 51775942 (+)
XLOC_037456 cd302 coding downstream 29164 51784922 ~ 51804828 (+)
XLOC_037457 CABZ01079550.1 coding downstream 126776 51882534 ~ 51884024 (+)
XLOC_037458 NA coding downstream 200267 51956025 ~ 51957617 (+)
XLOC_037459 NA coding downstream 206727 51962485 ~ 52006435 (+)
XLOC_037448 CABZ01079853.1 non-coding upstream 594675 51043455 ~ 51060961 (+)
XLOC_037447 NA non-coding upstream 714783 50940357 ~ 50940853 (+)
XLOC_037446 CABZ01053739.1 non-coding upstream 855163 50800357 ~ 50800473 (+)
XLOC_037460 CABZ01028277.1 non-coding downstream 326553 52082311 ~ 52082437 (+)
XLOC_037461 NA non-coding downstream 630782 52386540 ~ 52402421 (+)

Expression


Co-expression Network