XLOC_037465


Basic Information

Item Value
gene id XLOC_037465
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 52628244 ~ 52629286 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075228
atgtacattatccataaaataaaaaccaacaaCACTTCTCAATTCAGAAACATTAAGCATCTGAAcacaattaatgcatttactcacGTTTATAGATGAgatcttattttaaagtgtgatcATAATGCTGCCATTGCTACAGCTGCTTATTAAAAACAGGGAGATTGTACTTAGAAAACCAGAACCATCATGTGCTGGCTTTATCAAAAACATAACAAATTAAACTGACAGTCTTCTAATCAATACTCAATTATAAATGTTAACCAAGTAATATAAGGATATGAGCATTGTTCATAGCTATCTAGATAATAACAGGAGTAATGTAAACCAGTGTAAACATGATGCAAATGCAGAGGATGTGATCAGTTATAGGCACAGAGCTGGAGTTCACCCTCCTTTACTCATGAAAGGATGAGGTGTTTACCCGTTTAACGCTGGAGTGGCAGTGGTGTGTGTTAGTTTCAGGATGGCAGTAGTAGTGTGTGTTTTAGAAGCCAGTGTCGATGCTGAGCGAGCGCCGGGTCACATGTTCGATCTCTCCCGTCACATACTCATTGAAGGATGTCTGGTACTTTGCCAACATCTTCAGCATCAGACGCAGATTTAGCCACCACTGTGTCTTGGGCATTCGGTGTCTGCAAGACCAGAGAGACAGCTTATTATTAGTAGaactttacttttttacttttttaacacacacagctggaaatCTTAAAGATTCTCCAAACAGAACAAAACTGGTGTTTCtctaaaggtttat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075228 True 760 lncRNA 0.38 2 52628244 52629286

Neighbor

gene id symbol gene type direction distance location
XLOC_037464 si:ch211-241j8.2 coding upstream 3871 52613820 ~ 52624373 (+)
XLOC_037463 march4 coding upstream 88540 52492639 ~ 52539704 (+)
XLOC_037462 nme8 coding upstream 181248 52411530 ~ 52446996 (+)
XLOC_037461 NA coding upstream 225823 52386540 ~ 52402421 (+)
XLOC_037460 CABZ01028277.1 coding upstream 545807 52082311 ~ 52082437 (+)
XLOC_037466 CR753902.1 coding downstream 112910 52742196 ~ 52744063 (+)
XLOC_037467 NA coding downstream 379403 53008689 ~ 53010059 (+)
XLOC_037468 sox21b coding downstream 647070 53276356 ~ 53277722 (+)
XLOC_037469 dct coding downstream 698046 53327332 ~ 53352682 (+)
XLOC_037470 CABZ01084081.1 coding downstream 1008646 53637932 ~ 53646223 (+)
XLOC_037459 NA non-coding upstream 621809 51962485 ~ 52006435 (+)
XLOC_037458 NA non-coding upstream 670627 51956025 ~ 51957617 (+)
XLOC_037455 NA non-coding upstream 852302 51765534 ~ 51775942 (+)
XLOC_037473 NA non-coding downstream 1272703 53901989 ~ 53908885 (+)
XLOC_037480 NA non-coding downstream 1665292 54294578 ~ 54302390 (+)
XLOC_037481 NA non-coding downstream 1743805 54373091 ~ 54374908 (+)
XLOC_037483 NA non-coding downstream 1812801 54442087 ~ 54442507 (+)

Expression


Co-expression Network