Gene
RNA
| Item | Value |
|---|---|
| gene id | G1821939 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 1567872 ~ 1568322 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2085416 | True | 451 | lncRNA | 0.50 | 1 | 1567872 | 1568322 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515109 | LOC106611092 | coding | downstream | 10743 | 1517507 ~ 1557129 (-) |
| LOC110517589 | LOC106577065 | coding | downstream | 81260 | 1352981 ~ 1486612 (-) |
| LOC110515341 | LOC106577436 | coding | downstream | 223140 | 1305547 ~ 1344732 (-) |
| LOC118943914 | NA | coding | downstream | 675295 | 844436 ~ 892577 (-) |
| LOC110516366 | reep3 | coding | upstream | 304379 | 1872701 ~ 1912670 (-) |
| LOC118943822 | NA | coding | upstream | 327961 | 1896283 ~ 1896581 (-) |
| LOC118943847 | NA | coding | upstream | 680830 | 2246705 ~ 2249800 (-) |
| LOC110511972 | LOC106613891 | coding | upstream | 682194 | 2250516 ~ 2255447 (-) |
| LOC110519246 | LOC106591225 | coding | upstream | 754642 | 2322964 ~ 2324578 (-) |
| G1821938 | NA | non-coding | downstream | 481 | 1567008 ~ 1567391 (-) |
| G1821928 | NA | non-coding | downstream | 34176 | 1533403 ~ 1533696 (-) |
| G1821906 | NA | non-coding | downstream | 51973 | 1515362 ~ 1515899 (-) |
| G1821925 | NA | non-coding | downstream | 52685 | 1513906 ~ 1515187 (-) |
| G1821924 | NA | non-coding | downstream | 54872 | 1509809 ~ 1513000 (-) |
| G1821940 | NA | non-coding | upstream | 7231 | 1575553 ~ 1575948 (-) |
| G1821943 | NA | non-coding | upstream | 12017 | 1580339 ~ 1581054 (-) |
| G1821948 | NA | non-coding | upstream | 20894 | 1589216 ~ 1589496 (-) |
| G1821949 | NA | non-coding | upstream | 21606 | 1589928 ~ 1628063 (-) |
| G1821963 | NA | non-coding | upstream | 48172 | 1616494 ~ 1618150 (-) |
| G1821923 | NA | other | downstream | 54431 | 1502951 ~ 1513441 (-) |
| G1821682 | NA | other | downstream | 335605 | 1231836 ~ 1232267 (-) |
| G1820880 | NA | other | downstream | 1544388 | 22558 ~ 23484 (-) |
| G1820878 | NA | other | downstream | 1547630 | 19768 ~ 20242 (-) |
| G1822025 | NA | other | upstream | 195825 | 1763993 ~ 1766638 (-) |
| G1822081 | NA | other | upstream | 319886 | 1888208 ~ 1891148 (-) |
| G1822308 | LOC106577261 | other | upstream | 562990 | 2131312 ~ 2132511 (-) |
| G1822333 | NA | other | upstream | 632263 | 2200585 ~ 2250217 (-) |
| G1823141 | NA | other | upstream | 937245 | 2505567 ~ 2506443 (-) |
