Gene
RNA
| Item | Value |
|---|---|
| gene id | G1821943 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 1580339 ~ 1581054 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2085423 | True | 639 | lncRNA | 0.41 | 2 | 1580339 | 1581054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515109 | LOC106611092 | coding | downstream | 23210 | 1517507 ~ 1557129 (-) |
| LOC110517589 | LOC106577065 | coding | downstream | 93727 | 1352981 ~ 1486612 (-) |
| LOC110515341 | LOC106577436 | coding | downstream | 235607 | 1305547 ~ 1344732 (-) |
| LOC118943914 | NA | coding | downstream | 687762 | 844436 ~ 892577 (-) |
| LOC110516366 | reep3 | coding | upstream | 291647 | 1872701 ~ 1912670 (-) |
| LOC118943822 | NA | coding | upstream | 315229 | 1896283 ~ 1896581 (-) |
| LOC118943847 | NA | coding | upstream | 668098 | 2246705 ~ 2249800 (-) |
| LOC110511972 | LOC106613891 | coding | upstream | 669462 | 2250516 ~ 2255447 (-) |
| LOC110519246 | LOC106591225 | coding | upstream | 741910 | 2322964 ~ 2324578 (-) |
| G1821940 | NA | non-coding | downstream | 4391 | 1575553 ~ 1575948 (-) |
| G1821939 | NA | non-coding | downstream | 12017 | 1567872 ~ 1568322 (-) |
| G1821938 | NA | non-coding | downstream | 12948 | 1567008 ~ 1567391 (-) |
| G1821928 | NA | non-coding | downstream | 46643 | 1533403 ~ 1533696 (-) |
| G1821906 | NA | non-coding | downstream | 64440 | 1515362 ~ 1515899 (-) |
| G1821948 | NA | non-coding | upstream | 8162 | 1589216 ~ 1589496 (-) |
| G1821949 | NA | non-coding | upstream | 8874 | 1589928 ~ 1628063 (-) |
| G1821963 | NA | non-coding | upstream | 35440 | 1616494 ~ 1618150 (-) |
| G1821968 | NA | non-coding | upstream | 44219 | 1625273 ~ 1625545 (-) |
| G1821973 | NA | non-coding | upstream | 55720 | 1636774 ~ 1638713 (-) |
| G1821923 | NA | other | downstream | 66898 | 1502951 ~ 1513441 (-) |
| G1821682 | NA | other | downstream | 348072 | 1231836 ~ 1232267 (-) |
| G1820880 | NA | other | downstream | 1556855 | 22558 ~ 23484 (-) |
| G1820878 | NA | other | downstream | 1560097 | 19768 ~ 20242 (-) |
| G1822025 | NA | other | upstream | 183093 | 1763993 ~ 1766638 (-) |
| G1822081 | NA | other | upstream | 307154 | 1888208 ~ 1891148 (-) |
| G1822308 | LOC106577261 | other | upstream | 550258 | 2131312 ~ 2132511 (-) |
| G1822333 | NA | other | upstream | 619531 | 2200585 ~ 2250217 (-) |
| G1823141 | NA | other | upstream | 924513 | 2505567 ~ 2506443 (-) |
