G1822269


Basic Information

Item Value
gene id G1822269
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 2032260 ~ 2033118 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2085860
ctgacAGGGAGGGATCCCTCTGTGTCAACACTCAGCACTGTGACGGGGAGGGATCCCTCTGTGTCAACACTCAGCACTGTGACGGGGAGGGATCCCTCTGTGTCAACACTCAGCACTGTGACGGGGAGGGATCCCTCTGTGTCAACACCTTGCACCTTACCTTGCAGAGCGGGTAGCAGCCCTAAACATCAGCCTTCCCCTTCCCTGTCCGTTACCTTGCAGAGCGGGTAGCAGCCCTAAACATCGGCCTTCCCTGTCCGTTACCTTGCAGAGCGGGTAGCAGCCCTAAACATCAGCCTTCCCTGTCCGTTACCTTGCAGAGCGGGTAGCAGCCCTAAACATCGGCCTTCCCTGTCCGTTCCCTTGCAGAGCGGGTAGCAGCCCTAAACATCAGCCTTCCCTGTCCGTTACCTTGCAGAGCGGGTAGCAGCCCTAAACATCGGCCTTCCCTGTCCGTTCCCTTGCAGAGCGGGTAGCAGCCCTAAACATCAGCCTTCCCTGTCCGTTACCTTGCAGAGCGGGAAGCAGCCCTAAACATCAGCCTCCCCTTCCCTGTCCGTTACCTTGCAGAGCGGGTAGCAGCCCTAAACATCAGCCTTCCCcttccctgtctgttcccttGCAGAGCGGGTAGCAGCCCTAAACATCAGCCTTCCCcttccctgtctgttcccttGCAGAGCGGGTAGCAGCCCTAAACATCAGCCTTCCCcttccctgtctgttcccttGCAGAGCGGGTAGCAGCCCTAAAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2085860 True 755 lncRNA 0.59 2 2032260 2033118

Neighbor

gene id symbol gene type direction distance location
LOC110516366 reep3 coding downstream 119590 1872701 ~ 1912670 (-)
LOC118943822 NA coding downstream 135679 1896283 ~ 1896581 (-)
LOC110515109 LOC106611092 coding downstream 475131 1517507 ~ 1557129 (-)
LOC110517589 LOC106577065 coding downstream 545648 1352981 ~ 1486612 (-)
LOC110515341 LOC106577436 coding downstream 687528 1305547 ~ 1344732 (-)
LOC118943847 NA coding upstream 216034 2246705 ~ 2249800 (-)
LOC110511972 LOC106613891 coding upstream 217398 2250516 ~ 2255447 (-)
LOC110519246 LOC106591225 coding upstream 289846 2322964 ~ 2324578 (-)
LOC118943863 arid5b coding upstream 354903 2388021 ~ 2493351 (-)
LOC118943899 LOC106592999 coding upstream 480861 2513318 ~ 2528846 (-)
G1822265 NA non-coding downstream 5132 2025961 ~ 2027128 (-)
G1822229 NA non-coding downstream 91384 1940379 ~ 1940876 (-)
G1822110 NA non-coding downstream 99049 1933004 ~ 1933211 (-)
G1822109 NA non-coding downstream 100233 1931813 ~ 1932027 (-)
G1822098 NA non-coding downstream 108782 1914937 ~ 1923478 (-)
G1822299 NA non-coding upstream 64199 2097317 ~ 2104679 (-)
G1822300 NA non-coding upstream 65196 2098314 ~ 2098716 (-)
G1822320 LOC106592091 non-coding upstream 123841 2156959 ~ 2157433 (-)
G1822328 NA non-coding upstream 135258 2168376 ~ 2169018 (-)
G1822081 NA other downstream 141112 1888208 ~ 1891148 (-)
G1822025 NA other downstream 266723 1763993 ~ 1766638 (-)
G1821923 NA other downstream 518819 1502951 ~ 1513441 (-)
G1821682 NA other downstream 799993 1231836 ~ 1232267 (-)
G1822308 LOC106577261 other upstream 98194 2131312 ~ 2132511 (-)
G1822333 NA other upstream 167467 2200585 ~ 2250217 (-)
G1823141 NA other upstream 472449 2505567 ~ 2506443 (-)
LOC118943857 LOC106563104 other upstream 1250015 3281355 ~ 3325024 (-)

Expression


Co-expression Network