Gene
RNA
| Item | Value |
|---|---|
| gene id | G1822183 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 2066060 ~ 2066614 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2085756 | True | 428 | lncRNA | 0.43 | 2 | 2066060 | 2066614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513647 | LOC106577307 | coding | upstream | 280807 | 1780957 ~ 1785253 (+) |
| exoc6 | exoc6 | coding | upstream | 302042 | 1624386 ~ 1764018 (+) |
| hhex | hhex | coding | upstream | 499896 | 1562972 ~ 1566164 (+) |
| LOC110516888 | LOC106577303 | coding | upstream | 777632 | 1124471 ~ 1288428 (+) |
| LOC110517143 | LOC106577302 | coding | upstream | 948884 | 1113638 ~ 1117176 (+) |
| LOC118943846 | LOC106613874 | coding | downstream | 183278 | 2249824 ~ 2250254 (+) |
| LOC110511819 | LOC100194495 | coding | downstream | 247144 | 2313758 ~ 2316741 (+) |
| LOC110513179 | LOC106593625 | coding | downstream | 463842 | 2530456 ~ 2541369 (+) |
| LOC118943864 | NA | coding | downstream | 494433 | 2558920 ~ 2566321 (+) |
| LOC118943820 | NA | coding | downstream | 500440 | 2567054 ~ 2567312 (+) |
| G1822175 | NA | non-coding | upstream | 12356 | 2053221 ~ 2053704 (+) |
| G1822158 | NA | non-coding | upstream | 21932 | 2021065 ~ 2044128 (+) |
| G1822169 | NA | non-coding | upstream | 27024 | 2038315 ~ 2039036 (+) |
| G1822168 | NA | non-coding | upstream | 27802 | 2037923 ~ 2038258 (+) |
| G1822164 | NA | non-coding | upstream | 34883 | 2030859 ~ 2031177 (+) |
| G1822192 | NA | non-coding | downstream | 14819 | 2081433 ~ 2086026 (+) |
| G1822197 | NA | non-coding | downstream | 30731 | 2097345 ~ 2104676 (+) |
| G1822213 | NA | non-coding | downstream | 99636 | 2166250 ~ 2167766 (+) |
| LOC110512159 | LOC106591006 | non-coding | downstream | 110153 | 1934753 ~ 2203012 (+) |
| G1822221 | NA | non-coding | downstream | 177704 | 2244318 ~ 2245137 (+) |
| G1822059 | NA | other | upstream | 197553 | 1868008 ~ 1868507 (+) |
| G1821637 | LOC106577436 | other | upstream | 756756 | 1306706 ~ 1309304 (+) |
| G1820989 | NA | other | upstream | 1728744 | 336747 ~ 337316 (+) |
| LOC110519474 | mtr | other | upstream | 1811222 | 196406 ~ 274981 (+) |
| LOC110514481 | LOC106604002 | other | downstream | 510504 | 2576948 ~ 2647345 (+) |
| LOC110510594 | ank3 | other | downstream | 587141 | 2653755 ~ 2923588 (+) |
| G1822610 | NA | other | downstream | 688603 | 2755217 ~ 2761850 (+) |
| G1822758 | NA | other | downstream | 1191594 | 3258208 ~ 3269559 (+) |
