G1822308 (LOC106577261)


Basic Information

Item Value
gene id G1822308
gene name LOC106577261
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 2131312 ~ 2132511 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2085917
tctactgtgtgtttgtgtgtctactgtgtgtttgtgtgtctactgtgtgtttgtgtgtctactgtgtgtgagtgtgtctactgtgtgtgagtgtgtgtgagtgtgtactgtgtgagtgtgtctactGTGTGAGTGtctactgtgtgtgagtgtgtctactgtatgagtgtgtgtgtctactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagtgtgtgtgtcagtgtgtgagtgtgtcagtgtgtgagtgtgtcagtgtgtgagtgtgtgagtgtgtgtgtgtgtcagtgtgtgtgtgtgtgtgtcagtgtgtgtgtgtgtgtcagtgtgtgtgtgtgtgtcagtgtgtgtgtgtgtgtcagtgtgtgtgtgtgtgtcagtgtgtgagtgtgttagtgtgtgtgtgtcagtgtgtgagtgtgtgtgtgtcagtgtgtgagtgtgttagctGCTGAATTGAATACTGAGACTTACTCCCTGTGAAGATCTCCAGCGGTCTTGGCCGGTGGCAGAGGGGGGCTGGCGTGGGGGTTGATCTTGATGAGCCGGTGGGGGTCCGAGCGGTGTGGTTCTGAACGGTGGGGATGGGGGTCGGACCGGTGAGGGTCGGCGCTGGCTGGTCGGATGGGGACCGGGACGTGGCTCAGTTGGTCCAGGCtgtcagaggaggagacagggacctGGTGGTGTAGCCAAGGGCTGGCCGTGTTCTGGTACCACAAcatccagagagacagacagggtcagacccagagagacagacagggtcagtCCAACaacaaccagacagacagggtcagacacccagagagacagacagggtcagacccagagagacagacagggtcagtCCAACAAcatccagagagacagacagacagggtcagacccagagagacagggtcagtccaacaacaacaaccagacagacagacagggtcagacccagagagacagggtcagtccaacaacaacaaccagacagacagacagacagacagacagggtcagtCCAACGACAGACAGGGTCAGTCCAACGACAGACAGGGTCAGTCCAACGACAGACAGGGTCAGTCCAACGACAGACAGGGTCAGTccaacgacagacag

Function

NR:

description
probable JmjC domain-containing histone demethylation protein 2C, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2085917 True 1164 TUCP 0.54 2 2131312 2132511

Neighbor

gene id symbol gene type direction distance location
LOC110516366 reep3 coding downstream 218642 1872701 ~ 1912670 (-)
LOC118943822 NA coding downstream 234731 1896283 ~ 1896581 (-)
LOC110515109 LOC106611092 coding downstream 574183 1517507 ~ 1557129 (-)
LOC110517589 LOC106577065 coding downstream 644700 1352981 ~ 1486612 (-)
LOC110515341 LOC106577436 coding downstream 786580 1305547 ~ 1344732 (-)
LOC118943847 NA coding upstream 116641 2246705 ~ 2249800 (-)
LOC110511972 LOC106613891 coding upstream 118005 2250516 ~ 2255447 (-)
LOC110519246 LOC106591225 coding upstream 190453 2322964 ~ 2324578 (-)
LOC118943863 arid5b coding upstream 255510 2388021 ~ 2493351 (-)
LOC118943899 LOC106592999 coding upstream 381468 2513318 ~ 2528846 (-)
G1822299 NA non-coding downstream 26633 2097317 ~ 2104679 (-)
G1822300 NA non-coding downstream 32596 2098314 ~ 2098716 (-)
G1822269 NA non-coding downstream 98194 2032260 ~ 2033118 (-)
G1822265 NA non-coding downstream 104184 2025961 ~ 2027128 (-)
G1822229 NA non-coding downstream 190436 1940379 ~ 1940876 (-)
G1822320 LOC106592091 non-coding upstream 24448 2156959 ~ 2157433 (-)
G1822328 NA non-coding upstream 35865 2168376 ~ 2169018 (-)
G1822357 NA non-coding upstream 127947 2260458 ~ 2260708 (-)
G1822369 NA non-coding upstream 146531 2279042 ~ 2279594 (-)
G1822081 NA other downstream 240164 1888208 ~ 1891148 (-)
G1822025 NA other downstream 365775 1763993 ~ 1766638 (-)
G1821923 NA other downstream 617871 1502951 ~ 1513441 (-)
G1821682 NA other downstream 899045 1231836 ~ 1232267 (-)
G1822333 NA other upstream 68074 2200585 ~ 2250217 (-)
G1823141 NA other upstream 373056 2505567 ~ 2506443 (-)
LOC118943857 LOC106563104 other upstream 1150622 3281355 ~ 3325024 (-)
G1823530 NA other upstream 1373066 3505577 ~ 3506272 (-)

Expression


Co-expression Network