Gene
RNA
| Item | Value |
|---|---|
| gene id | G1822320 |
| gene name | LOC106592091 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 2156959 ~ 2157433 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| probable JmjC domain-containing histone demethylation protein 2C, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2085931 | True | 385 | lncRNA | 0.51 | 2 | 2156959 | 2157433 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516366 | reep3 | coding | downstream | 244289 | 1872701 ~ 1912670 (-) |
| LOC118943822 | NA | coding | downstream | 260378 | 1896283 ~ 1896581 (-) |
| LOC110515109 | LOC106611092 | coding | downstream | 599830 | 1517507 ~ 1557129 (-) |
| LOC110517589 | LOC106577065 | coding | downstream | 670347 | 1352981 ~ 1486612 (-) |
| LOC110515341 | LOC106577436 | coding | downstream | 812227 | 1305547 ~ 1344732 (-) |
| LOC118943847 | NA | coding | upstream | 91719 | 2246705 ~ 2249800 (-) |
| LOC110511972 | LOC106613891 | coding | upstream | 93083 | 2250516 ~ 2255447 (-) |
| LOC110519246 | LOC106591225 | coding | upstream | 165531 | 2322964 ~ 2324578 (-) |
| LOC118943863 | arid5b | coding | upstream | 230588 | 2388021 ~ 2493351 (-) |
| LOC118943899 | LOC106592999 | coding | upstream | 356546 | 2513318 ~ 2528846 (-) |
| G1822299 | NA | non-coding | downstream | 52280 | 2097317 ~ 2104679 (-) |
| G1822300 | NA | non-coding | downstream | 58243 | 2098314 ~ 2098716 (-) |
| G1822269 | NA | non-coding | downstream | 123841 | 2032260 ~ 2033118 (-) |
| G1822265 | NA | non-coding | downstream | 129831 | 2025961 ~ 2027128 (-) |
| G1822229 | NA | non-coding | downstream | 216083 | 1940379 ~ 1940876 (-) |
| G1822328 | NA | non-coding | upstream | 10943 | 2168376 ~ 2169018 (-) |
| G1822357 | NA | non-coding | upstream | 103025 | 2260458 ~ 2260708 (-) |
| G1822369 | NA | non-coding | upstream | 121609 | 2279042 ~ 2279594 (-) |
| G1822375 | NA | non-coding | upstream | 140789 | 2298222 ~ 2299230 (-) |
| G1822308 | LOC106577261 | other | downstream | 24448 | 2131312 ~ 2132511 (-) |
| G1822081 | NA | other | downstream | 265811 | 1888208 ~ 1891148 (-) |
| G1822025 | NA | other | downstream | 391422 | 1763993 ~ 1766638 (-) |
| G1821923 | NA | other | downstream | 643518 | 1502951 ~ 1513441 (-) |
| G1822333 | NA | other | upstream | 43152 | 2200585 ~ 2250217 (-) |
| G1823141 | NA | other | upstream | 348134 | 2505567 ~ 2506443 (-) |
| LOC118943857 | LOC106563104 | other | upstream | 1125700 | 3281355 ~ 3325024 (-) |
| G1823530 | NA | other | upstream | 1348144 | 3505577 ~ 3506272 (-) |
