G1823297


Basic Information

Item Value
gene id G1823297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 2838453 ~ 2839289 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2087301
gttgtattgtagtgttgtattgttgtgtttcagtgttgtagtgtttcagtggtgtagtgtttcagtgttgtagtgattcagtgttgtagtgtttcagtgttgtagtgtttcagtgttgtagtgattcagtgttgtagtgtttcagtgttgtagtgtttcagtgttgtagtgattcagtgttgtagtgtttcagtgttgtagtgtttcagtgttgtagtgattcagtgttgtagtgttgtattgttgtgtttcagtgttgtagtgtttcagtgttgtagtgtttcagtggtgtagtgtttcagtgttgtagtgattcagtgttgtagtgtttcagtgttgtagtgtttcagtgttgtagtgattcagtgttgtagtgtttcagtgttgtagtgtttcagtgttgtagtgattcagtgttgtagtgttgtattgtagtgtttcAGTGTAGTAGTGATTCAGTGTTGTAGTGattcagtgttgttgtgtttcagtgttgtagtgattcagtgttgttgtgtttcagtgttgtagtgttgtattgtagtgttgtattgtagtgttgtagtgttgtattgtagtgttgtattgtagtgttgtattgtagtgttgcagtgttgtattgtattgtagtgttgtattgtagtgtttcagtgttgtagtgtttcagtgttgtagtgtttcagtgttgtagtgtttcagtgctgtagtgtttcagtgttgtagtgtttcagtgttgtAGTGATTCAGT

Function

NR:

description
PREDICTED: extensin-1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2087301 True 748 lncRNA 0.37 2 2838453 2839289

Neighbor

gene id symbol gene type direction distance location
LOC110510403 LOC106591053 coding downstream 86578 2738091 ~ 2751875 (-)
LOC118943899 LOC106592999 coding downstream 309607 2513318 ~ 2528846 (-)
LOC118943863 arid5b coding downstream 345102 2388021 ~ 2493351 (-)
LOC110519246 LOC106591225 coding downstream 513875 2322964 ~ 2324578 (-)
LOC110511972 LOC106613891 coding downstream 583006 2250516 ~ 2255447 (-)
LOC110531337 LOC105026297 coding upstream 93280 2932569 ~ 2963524 (-)
LOC110518872 LOC106594258 coding upstream 138777 2978066 ~ 3007599 (-)
LOC110518874 LOC105026292 coding upstream 170415 3009704 ~ 3012943 (-)
LOC110518781 entpd1 coding upstream 261275 3100564 ~ 3172786 (-)
trnal-uaa-60 NA coding upstream 336770 3176059 ~ 3176131 (-)
G1823288 NA non-coding downstream 1968 2834489 ~ 2836485 (-)
G1823289 NA non-coding downstream 4395 2832696 ~ 2834058 (-)
G1823263 NA non-coding downstream 76321 2761266 ~ 2762132 (-)
G1823252 NA non-coding downstream 117232 2720118 ~ 2721221 (-)
G1823251 NA non-coding downstream 124549 2711782 ~ 2713904 (-)
G1823302 NA non-coding upstream 4146 2843435 ~ 2843911 (-)
G1823304 NA non-coding upstream 4667 2843956 ~ 2844883 (-)
G1823306 NA non-coding upstream 14324 2853613 ~ 2855073 (-)
G1823312 NA non-coding upstream 30558 2869847 ~ 2870660 (-)
G1823337 LOC106593456 non-coding upstream 70516 2909805 ~ 2910685 (-)
G1823141 NA other downstream 332010 2505567 ~ 2506443 (-)
G1822333 NA other downstream 588236 2200585 ~ 2250217 (-)
G1822308 LOC106577261 other downstream 705942 2131312 ~ 2132511 (-)
G1822081 NA other downstream 947305 1888208 ~ 1891148 (-)
LOC118943857 LOC106563104 other upstream 443844 3281355 ~ 3325024 (-)
G1823530 NA other upstream 666288 3505577 ~ 3506272 (-)
LOC118943921 LOC106600605 other upstream 715724 3553536 ~ 3601859 (-)
LOC118943842 LOC106577176 other upstream 951742 3791031 ~ 3820702 (-)
G1823691 NA other upstream 1005204 3844493 ~ 3846920 (-)

Expression


Co-expression Network