G1823324


Basic Information

Item Value
gene id G1823324
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 2943859 ~ 2948713 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2087338
catatcaggggtggagatggagagtgtgtcatgtattgtcatattatgtcttgttcctgttctttctcttcacttcgtctccctctgctggttgtattaggttaccttctcttcctctccttctcccagctgttcctcatcttctctaaactacctcgttcacccttttcccacctgttccttttttccctctgattaggtctctatttctctctctgttcctgcttctgtctttgtcagattctcgtttgagtttctcatgccagaaccaaactatcgtctcgtttgcttcaCCCTTGTCCCGTCCTGTCGatatctgcctgttcatctgatgctacgtgtgatcaggtacctctgtcctctacgacccgcgcctacccagagagaccagcagtctgtcgccgctaacccagctattctcctctgctgctaagaaggggACTCTTCTGTAAatatcagaaggactttatgattCATTtatcgccctctctgcgggttgtctattttgccattatatacatctgaagaggatctatgtcttccctgtgttttgacattaaaggactctgtttttgttaaaccgcttttgggtcctcactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2087338 True 600 lncRNA 0.46 2 2943859 2948713

Neighbor

gene id symbol gene type direction distance location
LOC110510403 LOC106591053 coding downstream 191984 2738091 ~ 2751875 (-)
LOC118943899 LOC106592999 coding downstream 415013 2513318 ~ 2528846 (-)
LOC118943863 arid5b coding downstream 450508 2388021 ~ 2493351 (-)
LOC110519246 LOC106591225 coding downstream 619281 2322964 ~ 2324578 (-)
LOC110511972 LOC106613891 coding downstream 688412 2250516 ~ 2255447 (-)
LOC110518872 LOC106594258 coding upstream 29353 2978066 ~ 3007599 (-)
LOC110518874 LOC105026292 coding upstream 60991 3009704 ~ 3012943 (-)
LOC110518781 entpd1 coding upstream 151851 3100564 ~ 3172786 (-)
trnal-uaa-60 NA coding upstream 227346 3176059 ~ 3176131 (-)
trnav-uac-24 NA coding upstream 228131 3176844 ~ 3176916 (-)
G1823342 NA non-coding downstream 18247 2924732 ~ 2925612 (-)
G1823340 NA non-coding downstream 25119 2916262 ~ 2918740 (-)
G1823337 LOC106593456 non-coding downstream 33174 2909805 ~ 2910685 (-)
G1823312 NA non-coding downstream 73199 2869847 ~ 2870660 (-)
G1823306 NA non-coding downstream 88786 2853613 ~ 2855073 (-)
G1823349 NA non-coding upstream 11676 2960389 ~ 2960656 (-)
G1823331 NA non-coding upstream 23231 2971944 ~ 2973007 (-)
G1823329 NA non-coding upstream 24826 2973539 ~ 2974094 (-)
G1823360 NA non-coding upstream 45817 2994530 ~ 2995619 (-)
G1823368 NA non-coding upstream 59480 3008193 ~ 3028448 (-)
G1823141 NA other downstream 437416 2505567 ~ 2506443 (-)
G1822333 NA other downstream 693642 2200585 ~ 2250217 (-)
G1822308 LOC106577261 other downstream 811348 2131312 ~ 2132511 (-)
G1822081 NA other downstream 1052711 1888208 ~ 1891148 (-)
LOC118943857 LOC106563104 other upstream 334420 3281355 ~ 3325024 (-)
G1823530 NA other upstream 556864 3505577 ~ 3506272 (-)
LOC118943921 LOC106600605 other upstream 606300 3553536 ~ 3601859 (-)
LOC118943842 LOC106577176 other upstream 842318 3791031 ~ 3820702 (-)
G1823691 NA other upstream 895780 3844493 ~ 3846920 (-)

Expression


Co-expression Network