Gene
RNA
| Item | Value |
|---|---|
| gene id | G1822689 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 3035571 ~ 3037277 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2086480 | True | 532 | lncRNA | 0.39 | 2 | 3035571 | 3037277 |
3,031,200
3,031,600
3,032,000
3,032,400
3,032,800
3,033,200
3,033,600
3,034,000
3,034,400
3,034,800
3,034,800
3,035,200
3,035,600
3,036,000
3,036,400
3,036,800
3,037,200
3,037,600
3,038,000
3,038,400
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518873 | LOC106598281 | coding | upstream | 14043 | 3018462 ~ 3021528 (+) |
| LOC110514011 | LOC106577402 | coding | upstream | 44864 | 2975536 ~ 2990707 (+) |
| LOC110510594 | ank3 | coding | upstream | 111983 | 2653755 ~ 2923588 (+) |
| LOC118943875 | NA | coding | upstream | 118141 | 2915979 ~ 2917430 (+) |
| LOC110514481 | LOC106604002 | coding | upstream | 388226 | 2576948 ~ 2647345 (+) |
| LOC110518782 | LOC105026310 | coding | downstream | 211 | 3037488 ~ 3094262 (+) |
| LOC118943854 | NA | coding | downstream | 388782 | 3426059 ~ 3430104 (+) |
| LOC118943944 | NA | coding | downstream | 621743 | 3659020 ~ 3659154 (+) |
| LOC110531516 | LOC106597820 | coding | downstream | 657086 | 3694363 ~ 3702585 (+) |
| LOC110513996 | xpo1b | coding | downstream | 671638 | 3708915 ~ 3779869 (+) |
| G1822678 | NA | non-coding | upstream | 7117 | 3008113 ~ 3028454 (+) |
| G1822670 | NA | non-coding | upstream | 40365 | 2993749 ~ 2995206 (+) |
| G1822659 | NA | non-coding | upstream | 75320 | 2959861 ~ 2960251 (+) |
| G1822658 | NA | non-coding | upstream | 78062 | 2957120 ~ 2957509 (+) |
| G1822682 | NA | non-coding | downstream | 8090 | 3045367 ~ 3047458 (+) |
| G1822696 | NA | non-coding | downstream | 18803 | 3056080 ~ 3056790 (+) |
| G1822703 | NA | non-coding | downstream | 49561 | 3086838 ~ 3087338 (+) |
| G1822681 | entpd1 | non-coding | downstream | 61040 | 3098317 ~ 3172748 (+) |
| G1822728 | NA | non-coding | downstream | 119809 | 3157086 ~ 3157746 (+) |
| G1822610 | NA | other | upstream | 273721 | 2755217 ~ 2761850 (+) |
| LOC110512159 | LOC106591006 | other | upstream | 901382 | 1934753 ~ 2203012 (+) |
| G1822059 | NA | other | upstream | 1167064 | 1868008 ~ 1868507 (+) |
| G1822758 | NA | other | downstream | 220931 | 3258208 ~ 3269559 (+) |
| G1822769 | NA | other | downstream | 242415 | 3279692 ~ 3280453 (+) |
| G1822927 | NA | other | downstream | 711427 | 3748704 ~ 3749129 (+) |
| G1823015 | NA | other | downstream | 755695 | 3792972 ~ 3797118 (+) |
| G1822905 | LOC100136344 | other | downstream | 863529 | 3900806 ~ 3918363 (+) |
