G1823381


Basic Information

Item Value
gene id G1823381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 3047146 ~ 3049540 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2087420
GTGTTCAGACAGAGTTTTCTTAACATTGTTTTTGATAAAGGTGTTATGGCTAGTGAAGGTGTTATTGATAgtgaaggtgttatggatagtgaagGTGTTATGGACAGTGGATAgcaaaggtgttatggatagtgaagGTTTGATTGATAGTGGATAGTGAAGgtgttatggatagtgaaggtgttatggatagtggatagtaaaggtgttatggatagtgaaggtgttatggatagtggatagtaaagaTGTTATGGATAGTAAGGGTGTtatggatagtaaaggtgttatggatagggaaggtgttatggatagtggatagtaaaggtgttatggatagtggatagtaaaggtgttatggatagtggatagtaaaggtgttatgggtAGTGGATAGTAAATGTGTTATGGGTAGTGGATAGTAaatgtgttatgatagtggatagtaaaggtgttatggatagtggagagtaaaggtgttatggatagtggatagtaaatgtgttatggatagtggatagtaaatgtgttatggatagtggatagtaaatgtgttatggatagtggatagtggagagcaaaggtgttatggatagtggatagtaaaggtgttatggatagtggagaGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2087420 True 632 lncRNA 0.37 5 3047146 3049540

Neighbor

gene id symbol gene type direction distance location
LOC110518874 LOC105026292 coding downstream 34203 3009704 ~ 3012943 (-)
LOC110518872 LOC106594258 coding downstream 39547 2978066 ~ 3007599 (-)
LOC110531337 LOC105026297 coding downstream 83622 2932569 ~ 2963524 (-)
LOC110510403 LOC106591053 coding downstream 295271 2738091 ~ 2751875 (-)
LOC118943899 LOC106592999 coding downstream 518300 2513318 ~ 2528846 (-)
LOC110518781 entpd1 coding upstream 51024 3100564 ~ 3172786 (-)
trnal-uaa-60 NA coding upstream 126519 3176059 ~ 3176131 (-)
trnav-uac-24 NA coding upstream 127304 3176844 ~ 3176916 (-)
trnav-uac-25 NA coding upstream 134162 3183702 ~ 3183774 (-)
trnav-uac-26 NA coding upstream 134953 3184493 ~ 3184565 (-)
G1823368 NA non-coding downstream 18698 3008193 ~ 3028448 (-)
G1823375 NA non-coding downstream 23825 3022342 ~ 3023321 (-)
G1823374 LOC106598281 non-coding downstream 25761 3019891 ~ 3021385 (-)
G1823360 NA non-coding downstream 51527 2994530 ~ 2995619 (-)
G1823329 NA non-coding downstream 73052 2973539 ~ 2974094 (-)
G1823394 NA non-coding upstream 21626 3071166 ~ 3079405 (-)
G1823411 NA non-coding upstream 90566 3140106 ~ 3177165 (-)
G1823431 NA non-coding upstream 128409 3177949 ~ 3178340 (-)
G1823433 NA non-coding upstream 131433 3180973 ~ 3181192 (-)
G1823434 NA non-coding upstream 132414 3181954 ~ 3182513 (-)
G1823141 NA other downstream 540703 2505567 ~ 2506443 (-)
G1822333 NA other downstream 796929 2200585 ~ 2250217 (-)
G1822308 LOC106577261 other downstream 914635 2131312 ~ 2132511 (-)
G1822081 NA other downstream 1155998 1888208 ~ 1891148 (-)
LOC118943857 LOC106563104 other upstream 233593 3281355 ~ 3325024 (-)
G1823530 NA other upstream 456037 3505577 ~ 3506272 (-)
LOC118943921 LOC106600605 other upstream 505473 3553536 ~ 3601859 (-)
LOC118943842 LOC106577176 other upstream 741491 3791031 ~ 3820702 (-)
G1823691 NA other upstream 794953 3844493 ~ 3846920 (-)

Expression


Co-expression Network