Gene
RNA
| Item | Value |
|---|---|
| gene id | G1822696 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 3056080 ~ 3056790 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2086488 | True | 491 | lncRNA | 0.37 | 2 | 3056080 | 3056790 |
3,053,600
3,054,000
3,054,400
3,054,800
3,055,200
3,055,600
3,056,000
3,056,400
3,056,800
3,057,200
3,057,600
3,058,000
3,058,400
3,058,800
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518873 | LOC106598281 | coding | upstream | 34552 | 3018462 ~ 3021528 (+) |
| LOC110514011 | LOC106577402 | coding | upstream | 65373 | 2975536 ~ 2990707 (+) |
| LOC110510594 | ank3 | coding | upstream | 132492 | 2653755 ~ 2923588 (+) |
| LOC118943875 | NA | coding | upstream | 138650 | 2915979 ~ 2917430 (+) |
| LOC110514481 | LOC106604002 | coding | upstream | 408735 | 2576948 ~ 2647345 (+) |
| LOC118943854 | NA | coding | downstream | 369269 | 3426059 ~ 3430104 (+) |
| LOC118943944 | NA | coding | downstream | 602230 | 3659020 ~ 3659154 (+) |
| LOC110531516 | LOC106597820 | coding | downstream | 637573 | 3694363 ~ 3702585 (+) |
| LOC110513996 | xpo1b | coding | downstream | 652125 | 3708915 ~ 3779869 (+) |
| LOC118943889 | NA | coding | downstream | 895576 | 3950792 ~ 3953879 (+) |
| G1822682 | NA | non-coding | upstream | 8622 | 3045367 ~ 3047458 (+) |
| G1822689 | NA | non-coding | upstream | 18803 | 3035571 ~ 3037277 (+) |
| G1822678 | NA | non-coding | upstream | 27626 | 3008113 ~ 3028454 (+) |
| G1822670 | NA | non-coding | upstream | 60874 | 2993749 ~ 2995206 (+) |
| G1822703 | NA | non-coding | downstream | 30048 | 3086838 ~ 3087338 (+) |
| G1822681 | entpd1 | non-coding | downstream | 41527 | 3098317 ~ 3172748 (+) |
| G1822728 | NA | non-coding | downstream | 100296 | 3157086 ~ 3157746 (+) |
| G1822742 | NA | non-coding | downstream | 121088 | 3177878 ~ 3178341 (+) |
| G1822745 | NA | non-coding | downstream | 125162 | 3181952 ~ 3182235 (+) |
| G1822610 | NA | other | upstream | 294230 | 2755217 ~ 2761850 (+) |
| LOC110512159 | LOC106591006 | other | upstream | 921891 | 1934753 ~ 2203012 (+) |
| G1822059 | NA | other | upstream | 1187573 | 1868008 ~ 1868507 (+) |
| G1822758 | NA | other | downstream | 201418 | 3258208 ~ 3269559 (+) |
| G1822769 | NA | other | downstream | 222902 | 3279692 ~ 3280453 (+) |
| G1822927 | NA | other | downstream | 691914 | 3748704 ~ 3749129 (+) |
| G1823015 | NA | other | downstream | 736182 | 3792972 ~ 3797118 (+) |
| G1822905 | LOC100136344 | other | downstream | 844016 | 3900806 ~ 3918363 (+) |
