G1823560


Basic Information

Item Value
gene id G1823560
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 3580948 ~ 3613716 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2087645
TAAGAGAAACTttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtagactagttgagaacacctttatttaaccaggtagactagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtagactagttgagaacacctttatataaccaggtagactagttgagaacacctttatataaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatataaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatataaccaggtaggctagttgagaacacctttatataaccaggtaggctagttgagaacacctttatataaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacaagttctcatttgcaactgcgacctggccaagataaagcaaagcagtgtgacacagacaacagagttacacatggagtaaacaattaacaagtcaataacaccgtagagaaaagaaagtctatatacagtgtgtgcaaaaggcatgaggaggtaggc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106587709, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2087645 True 671 lncRNA 0.39 4 3580948 3613716

Neighbor

gene id symbol gene type direction distance location
LOC118943909 NA coding downstream 39628 3539615 ~ 3541320 (-)
LOC110514665 LOC106577322 coding downstream 60937 3325040 ~ 3520011 (-)
LOC118943858 NA coding downstream 156098 3424368 ~ 3425279 (-)
LOC118943857 LOC106563104 coding downstream 255924 3281355 ~ 3325024 (-)
trnav-uac-97 NA coding downstream 340988 3239888 ~ 3239960 (-)
LOC118936584 LOC106577178 coding upstream 71891 3685607 ~ 3693195 (-)
LOC118943842 LOC106577176 coding upstream 177323 3791031 ~ 3820702 (-)
LOC118936586 pex13 coding upstream 207573 3821289 ~ 3830217 (-)
rel LOC106577316 coding upstream 254340 3868056 ~ 3895511 (-)
LOC110531464 alb1 coding upstream 287186 3900902 ~ 3914858 (-)
G1823558 NA non-coding downstream 1871 3578196 ~ 3579077 (-)
LOC118943921 LOC106600605 non-coding downstream 19901 3553536 ~ 3601859 (-)
G1823511 NA non-coding downstream 36089 3439977 ~ 3544859 (-)
G1823573 NA non-coding upstream 11596 3625312 ~ 3625539 (-)
G1823574 NA non-coding upstream 11976 3625692 ~ 3659004 (-)
G1823575 NA non-coding upstream 14055 3627771 ~ 3667966 (-)
G1823586 NA non-coding upstream 34218 3647934 ~ 3650649 (-)
G1823596 NA non-coding upstream 62440 3676156 ~ 3676454 (-)
G1823530 NA other downstream 74676 3505577 ~ 3506272 (-)
LOC118943899 LOC106592999 other downstream 1064025 2513318 ~ 2528846 (-)
G1823141 NA other downstream 1074505 2505567 ~ 2506443 (-)
G1823691 NA other upstream 230777 3844493 ~ 3846920 (-)
G1823705 NA other upstream 290005 3903721 ~ 3906049 (-)
G1823710 NA other upstream 320177 3933893 ~ 3936043 (-)
G1824125 NA other upstream 1047875 4661591 ~ 4662234 (-)

Expression


Co-expression Network