Gene
RNA
| Item | Value |
|---|---|
| gene id | G1822955 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 3624931 ~ 3625161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: leucine-rich repeat extensin-like protein 5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2086835 | True | 231 | lncRNA | 0.61 | 1 | 3624931 | 3625161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943854 | NA | coding | upstream | 194827 | 3426059 ~ 3430104 (+) |
| LOC110518782 | LOC105026310 | coding | upstream | 530669 | 3037488 ~ 3094262 (+) |
| LOC110518873 | LOC106598281 | coding | upstream | 603403 | 3018462 ~ 3021528 (+) |
| LOC110514011 | LOC106577402 | coding | upstream | 634224 | 2975536 ~ 2990707 (+) |
| LOC118943875 | NA | coding | upstream | 707501 | 2915979 ~ 2917430 (+) |
| LOC118943944 | NA | coding | downstream | 33859 | 3659020 ~ 3659154 (+) |
| LOC110531516 | LOC106597820 | coding | downstream | 69202 | 3694363 ~ 3702585 (+) |
| LOC110513996 | xpo1b | coding | downstream | 83754 | 3708915 ~ 3779869 (+) |
| LOC118943889 | NA | coding | downstream | 327205 | 3950792 ~ 3953879 (+) |
| LOC118943888 | LOC106613810 | coding | downstream | 352459 | 3977620 ~ 3997300 (+) |
| G1822951 | NA | non-coding | upstream | 7686 | 3616270 ~ 3617245 (+) |
| G1822945 | NA | non-coding | upstream | 23764 | 3599199 ~ 3601167 (+) |
| G1822863 | NA | non-coding | upstream | 37328 | 3501080 ~ 3587603 (+) |
| G1822885 | NA | non-coding | upstream | 85863 | 3538636 ~ 3539068 (+) |
| G1822869 | NA | non-coding | upstream | 107133 | 3517344 ~ 3517798 (+) |
| G1822961 | NA | non-coding | downstream | 11004 | 3636165 ~ 3640970 (+) |
| G1822981 | NA | non-coding | downstream | 45180 | 3670341 ~ 3670546 (+) |
| G1822983 | NA | non-coding | downstream | 60450 | 3685611 ~ 3686400 (+) |
| G1822986 | NA | non-coding | downstream | 64674 | 3689835 ~ 3690115 (+) |
| G1822988 | NA | non-coding | downstream | 71629 | 3696790 ~ 3697181 (+) |
| G1822769 | NA | other | upstream | 344478 | 3279692 ~ 3280453 (+) |
| G1822758 | NA | other | upstream | 355372 | 3258208 ~ 3269559 (+) |
| LOC110510594 | ank3 | other | upstream | 751575 | 2653755 ~ 2923588 (+) |
| G1822610 | NA | other | upstream | 863081 | 2755217 ~ 2761850 (+) |
| LOC110514481 | LOC106604002 | other | upstream | 1044117 | 2576948 ~ 2647345 (+) |
| G1822927 | NA | other | downstream | 123543 | 3748704 ~ 3749129 (+) |
| G1823015 | NA | other | downstream | 167811 | 3792972 ~ 3797118 (+) |
| G1822905 | LOC100136344 | other | downstream | 275645 | 3900806 ~ 3918363 (+) |
| G1823100 | NA | other | downstream | 379138 | 4004299 ~ 4005323 (+) |
| G1824228 | NA | other | downstream | 1180335 | 4805496 ~ 4819568 (+) |
