Gene
RNA
| Item | Value |
|---|---|
| gene id | G1823057 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 3899000 ~ 3900302 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2086971 | True | 385 | lncRNA | 0.39 | 2 | 3899000 | 3900302 |
3,896,400
3,896,800
3,897,200
3,897,600
3,898,000
3,898,400
3,898,800
3,899,200
3,899,600
3,899,600
3,900,000
3,900,400
3,900,800
3,901,200
3,901,600
3,902,000
3,902,400
3,902,800
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513996 | xpo1b | coding | upstream | 119131 | 3708915 ~ 3779869 (+) |
| LOC110531516 | LOC106597820 | coding | upstream | 196415 | 3694363 ~ 3702585 (+) |
| LOC118943944 | NA | coding | upstream | 239846 | 3659020 ~ 3659154 (+) |
| LOC118943854 | NA | coding | upstream | 468896 | 3426059 ~ 3430104 (+) |
| LOC110518782 | LOC105026310 | coding | upstream | 804738 | 3037488 ~ 3094262 (+) |
| LOC118943889 | NA | coding | downstream | 52064 | 3950792 ~ 3953879 (+) |
| LOC118943888 | LOC106613810 | coding | downstream | 77318 | 3977620 ~ 3997300 (+) |
| LOC118936585 | LOC106613918 | coding | downstream | 363967 | 4264269 ~ 4358867 (+) |
| LOC118943908 | NA | coding | downstream | 710844 | 4611146 ~ 4614263 (+) |
| LOC118943915 | NA | coding | downstream | 811545 | 4711847 ~ 4775191 (+) |
| G1823046 | NA | non-coding | upstream | 38223 | 3860568 ~ 3860777 (+) |
| G1823029 | NA | non-coding | upstream | 82011 | 3816133 ~ 3816989 (+) |
| G1823018 | NA | non-coding | upstream | 98274 | 3800379 ~ 3800726 (+) |
| G1823017 | NA | non-coding | upstream | 99174 | 3797872 ~ 3799826 (+) |
| G1823014 | NA | non-coding | upstream | 106131 | 3791944 ~ 3792869 (+) |
| G1822905 | LOC100136344 | non-coding | downstream | 504 | 3900806 ~ 3918363 (+) |
| G1823082 | LOC106577330 | non-coding | downstream | 64748 | 3965050 ~ 3966096 (+) |
| G1823092 | NA | non-coding | downstream | 79406 | 3979708 ~ 3980188 (+) |
| G1823097 | NA | non-coding | downstream | 86585 | 3986887 ~ 3987379 (+) |
| G1823015 | NA | other | upstream | 101882 | 3792972 ~ 3797118 (+) |
| G1822927 | NA | other | upstream | 149871 | 3748704 ~ 3749129 (+) |
| G1822769 | NA | other | upstream | 618547 | 3279692 ~ 3280453 (+) |
| G1822758 | NA | other | upstream | 629441 | 3258208 ~ 3269559 (+) |
| G1822610 | NA | other | upstream | 1137150 | 2755217 ~ 2761850 (+) |
| G1823100 | NA | other | downstream | 103997 | 4004299 ~ 4005323 (+) |
| G1824228 | NA | other | downstream | 905194 | 4805496 ~ 4819568 (+) |
| G1824231 | LOC107579696 | other | downstream | 926650 | 4826952 ~ 4827299 (+) |
| G1824676 | LOC106593814 | other | downstream | 1577811 | 5478113 ~ 5487048 (+) |
