Gene
RNA
| Item | Value |
|---|---|
| gene id | G1823724 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 3990641 ~ 3991228 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2087863 | True | 508 | lncRNA | 0.53 | 2 | 3990641 | 3991228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510589 | papolg | coding | downstream | 15833 | 3950790 ~ 3974808 (-) |
| LOC110532916 | LOC106577328 | coding | downstream | 52714 | 3925321 ~ 3937927 (-) |
| LOC110531464 | alb1 | coding | downstream | 75783 | 3900902 ~ 3914858 (-) |
| rel | LOC106577316 | coding | downstream | 95130 | 3868056 ~ 3895511 (-) |
| LOC118936586 | pex13 | coding | downstream | 160424 | 3821289 ~ 3830217 (-) |
| LOC118943849 | NA | coding | upstream | 8707 | 3999935 ~ 4001461 (-) |
| LOC118943848 | NA | coding | upstream | 11474 | 4002702 ~ 4006322 (-) |
| LOC110531385 | LOC106594327 | coding | upstream | 15853 | 4007081 ~ 4038275 (-) |
| LOC118943901 | NA | coding | upstream | 1160152 | 5151380 ~ 5153682 (-) |
| LOC118943892 | LOC106592985 | coding | upstream | 1181175 | 5172031 ~ 5321235 (-) |
| G1823717 | NA | non-coding | downstream | 41976 | 3948438 ~ 3948665 (-) |
| G1823642 | NA | non-coding | downstream | 108924 | 3878206 ~ 3881717 (-) |
| G1823699 | NA | non-coding | downstream | 116663 | 3873475 ~ 3873978 (-) |
| G1823694 | NA | non-coding | downstream | 130820 | 3859573 ~ 3859821 (-) |
| G1823683 | NA | non-coding | downstream | 158084 | 3831900 ~ 3832557 (-) |
| G1823725 | NA | non-coding | upstream | 76 | 3991304 ~ 3991819 (-) |
| G1823734 | NA | non-coding | upstream | 27580 | 4018808 ~ 4020441 (-) |
| G1823742 | NA | non-coding | upstream | 42146 | 4033374 ~ 4034464 (-) |
| G1823710 | NA | other | downstream | 54598 | 3933893 ~ 3936043 (-) |
| G1823705 | NA | other | downstream | 84592 | 3903721 ~ 3906049 (-) |
| G1823691 | NA | other | downstream | 143721 | 3844493 ~ 3846920 (-) |
| LOC118943842 | LOC106577176 | other | downstream | 190087 | 3791031 ~ 3820702 (-) |
| LOC118943921 | LOC106600605 | other | downstream | 432816 | 3553536 ~ 3601859 (-) |
| G1824125 | NA | other | upstream | 670363 | 4661591 ~ 4662234 (-) |
| G1824416 | NA | other | upstream | 814236 | 4805464 ~ 4820448 (-) |
| G1824458 | NA | other | upstream | 935185 | 4926413 ~ 4926815 (-) |
| G1824524 | NA | other | upstream | 1128532 | 5119760 ~ 5120944 (-) |
| G1824540 | NA | other | upstream | 1174580 | 5165808 ~ 5166374 (-) |
