G1824216


Basic Information

Item Value
gene id G1824216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 4801118 ~ 4802145 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2088460
ATTTTAGTGTGCATCATCAAATCAactcaaagtgtatttgtcacgtgcaccgaatataacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcgcagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacagctgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcgcagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaattctgaatacaacatgtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtaaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtaggtagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2088460 True 722 lncRNA 0.41 3 4801118 4802145

Neighbor

gene id symbol gene type direction distance location
LOC118943824 NA coding upstream 21644 4778594 ~ 4779474 (+)
LOC118943867 NA coding upstream 23648 4776634 ~ 4777470 (+)
LOC118943915 NA coding upstream 25927 4711847 ~ 4775191 (+)
LOC118943908 NA coding upstream 186855 4611146 ~ 4614263 (+)
LOC118936585 LOC106613918 coding upstream 444012 4264269 ~ 4358867 (+)
LOC118943916 NA coding downstream 102822 4904967 ~ 4919251 (+)
LOC118943917 NA coding downstream 213501 5015646 ~ 5046380 (+)
LOC110531814 clrn3 coding downstream 526974 5329119 ~ 5335430 (+)
LOC118943907 NA coding downstream 548600 5350745 ~ 5352626 (+)
LOC118943911 LOC106589166 coding downstream 902819 5704964 ~ 5739232 (+)
G1824210 NA non-coding upstream 10812 4788040 ~ 4790306 (+)
G1824206 NA non-coding upstream 24182 4775883 ~ 4776936 (+)
G1824171 NA non-coding upstream 78706 4722213 ~ 4722412 (+)
G1824167 NA non-coding upstream 87838 4713035 ~ 4713280 (+)
G1824165 NA non-coding upstream 90953 4709918 ~ 4710165 (+)
G1824228 NA non-coding downstream 3351 4805496 ~ 4819568 (+)
G1824250 NA non-coding downstream 91306 4893451 ~ 4893687 (+)
G1824253 NA non-coding downstream 100319 4902464 ~ 4902692 (+)
G1824260 NA non-coding downstream 113800 4915945 ~ 4916554 (+)
G1824284 NA non-coding downstream 184868 4987013 ~ 5001349 (+)
G1823100 NA other upstream 795795 4004299 ~ 4005323 (+)
G1822905 LOC100136344 other upstream 886282 3900806 ~ 3918363 (+)
G1823015 NA other upstream 1004000 3792972 ~ 3797118 (+)
G1822927 NA other upstream 1051989 3748704 ~ 3749129 (+)
G1822769 NA other upstream 1520665 3279692 ~ 3280453 (+)
G1824231 LOC107579696 other downstream 24807 4826952 ~ 4827299 (+)
G1824676 LOC106593814 other downstream 675968 5478113 ~ 5487048 (+)
G1824784 NA other downstream 918078 5720223 ~ 5720741 (+)
G1824861 NA other downstream 1081658 5883803 ~ 5884315 (+)

Expression

G1824216 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G1824216 Expression in each Bioproject

Bar chart with 17 bars.
G1824216 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network