Gene
RNA
| Item | Value |
|---|---|
| gene id | G1824427 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 4822991 ~ 4823355 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: leucine-rich repeat extensin-like protein 5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2088864 | True | 365 | lncRNA | 0.38 | 1 | 4822991 | 4823355 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531385 | LOC106594327 | coding | downstream | 784716 | 4007081 ~ 4038275 (-) |
| LOC118943848 | NA | coding | downstream | 816669 | 4002702 ~ 4006322 (-) |
| LOC118943849 | NA | coding | downstream | 821530 | 3999935 ~ 4001461 (-) |
| LOC110510589 | papolg | coding | downstream | 848183 | 3950790 ~ 3974808 (-) |
| LOC110532916 | LOC106577328 | coding | downstream | 885064 | 3925321 ~ 3937927 (-) |
| LOC118943901 | NA | coding | upstream | 328025 | 5151380 ~ 5153682 (-) |
| LOC118943892 | LOC106592985 | coding | upstream | 349048 | 5172031 ~ 5321235 (-) |
| LOC118943918 | NA | coding | upstream | 517168 | 5340523 ~ 5350428 (-) |
| LOC118943897 | LOC106613906 | coding | upstream | 600044 | 5423399 ~ 5425606 (-) |
| LOC110514830 | dock1 | coding | upstream | 636973 | 5460328 ~ 5999146 (-) |
| G1824416 | NA | non-coding | downstream | 2543 | 4805464 ~ 4820448 (-) |
| G1824417 | NA | non-coding | downstream | 30969 | 4785707 ~ 4792022 (-) |
| G1824203 | NA | non-coding | downstream | 61499 | 4761232 ~ 4761492 (-) |
| G1824201 | NA | non-coding | downstream | 62432 | 4760304 ~ 4760559 (-) |
| G1824196 | NA | non-coding | downstream | 64355 | 4758417 ~ 4758636 (-) |
| G1824435 | NA | non-coding | upstream | 14886 | 4838241 ~ 4840143 (-) |
| G1824439 | NA | non-coding | upstream | 33082 | 4856437 ~ 4857223 (-) |
| G1824443 | NA | non-coding | upstream | 43535 | 4866890 ~ 4867471 (-) |
| G1824445 | NA | non-coding | upstream | 49191 | 4872546 ~ 4872813 (-) |
| G1824453 | NA | non-coding | upstream | 88288 | 4911643 ~ 4911893 (-) |
| G1824125 | NA | other | downstream | 160757 | 4661591 ~ 4662234 (-) |
| G1823710 | NA | other | downstream | 886948 | 3933893 ~ 3936043 (-) |
| G1823705 | NA | other | downstream | 916942 | 3903721 ~ 3906049 (-) |
| G1823691 | NA | other | downstream | 976071 | 3844493 ~ 3846920 (-) |
| G1824458 | NA | other | upstream | 103058 | 4926413 ~ 4926815 (-) |
| G1824524 | NA | other | upstream | 296405 | 5119760 ~ 5120944 (-) |
| G1824540 | NA | other | upstream | 342453 | 5165808 ~ 5166374 (-) |
| G1824561 | NA | other | upstream | 413022 | 5236377 ~ 5236732 (-) |
| G1824563 | NA | other | upstream | 423653 | 5247008 ~ 5247957 (-) |
