G1825041


Basic Information

Item Value
gene id G1825041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 5866464 ~ 5869117 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2089743
gtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatacaaactgttacagtccagattcctccatactaactgttacagtccagattcctccatacaaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattctgcctccatactaactgttacagtccagattcctccatacaaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagaccagattc
>TU2089739
cagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattctgcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactgttacagtccagattcctccatactaactgttacagtccagattcctccatacaaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatacttttacagtccagattcctccatactaactgttacagtccagattcctccatacaaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatacaaactgttacagtccagattcctccatacaaactgttacagtccagattcctccatactaactgttacagtccagattcctccatacaaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattctgcctccatactaactgttacagtccagattctgcctccatactaactgttacagtccagattcctccatactaactgttacaatCCAGATTCTGCCTCCATacaaactgttacagtccagattcctccatacaaactgttacagtccagattcctccatactaactgttacagtccagattctgcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctccatactaactgttacagtccagattcctcc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106570770

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2089743 False 477 lncRNA 0.42 2 5866464 5867544
TU2089739 True 1236 lncRNA 0.42 2 5867589 5869117

Neighbor

gene id symbol gene type direction distance location
LOC118943912 NA coding downstream 360987 5503698 ~ 5505477 (-)
LOC118943897 LOC106613906 coding downstream 440858 5423399 ~ 5425606 (-)
LOC118943918 NA coding downstream 516036 5340523 ~ 5350428 (-)
LOC118943892 LOC106592985 coding downstream 545229 5172031 ~ 5321235 (-)
LOC118943901 NA coding downstream 712782 5151380 ~ 5153682 (-)
LOC110515214 bccip coding upstream 497904 6367021 ~ 6376535 (-)
LOC110510773 LOC106613841 coding upstream 877256 6746373 ~ 6813723 (-)
LOC110518105 LOC106592890 coding upstream 1016237 6885354 ~ 6901189 (-)
LOC118943880 gpr26 coding upstream 1528042 7397159 ~ 7409361 (-)
LOC110531557 fbx37 coding upstream 2105802 7974919 ~ 7979808 (-)
G1825034 NA non-coding downstream 26958 5839208 ~ 5839506 (-)
G1825030 NA non-coding downstream 42862 5823240 ~ 5823602 (-)
G1825029 NA non-coding downstream 44455 5821570 ~ 5822009 (-)
G1825024 NA non-coding downstream 49833 5816364 ~ 5816631 (-)
G1825018 NA non-coding downstream 60523 5805176 ~ 5805941 (-)
G1825070 NA non-coding upstream 98251 5967368 ~ 5969178 (-)
G1825080 NA non-coding upstream 121730 5990847 ~ 5991214 (-)
G1825085 NA non-coding upstream 131952 6001069 ~ 6001346 (-)
G1825136 NA non-coding upstream 135417 6004534 ~ 6015319 (-)
G1825146 NA non-coding upstream 155345 6024462 ~ 6025554 (-)
G1824605 NA other downstream 526563 5338573 ~ 5339901 (-)
G1824563 NA other downstream 618507 5247008 ~ 5247957 (-)
G1824561 NA other downstream 629732 5236377 ~ 5236732 (-)
G1824540 NA other downstream 700090 5165808 ~ 5166374 (-)
G1824524 NA other downstream 745520 5119760 ~ 5120944 (-)
LOC110514830 dock1 other upstream 75995 5460328 ~ 5999146 (-)
G1825145 NA other upstream 152419 6021536 ~ 6023962 (-)
G1825493 LOC106593079 other upstream 482971 6352088 ~ 6354021 (-)
G1825582 NA other upstream 789001 6658118 ~ 6659951 (-)
G1825658 NA other upstream 954051 6823168 ~ 6825818 (-)

Expression


Co-expression Network