G1825148


Basic Information

Item Value
gene id G1825148
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 6033228 ~ 6034885 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2089873
ataacattcccctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattttactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcccctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcagatggtatattatactccataacattcctctcctactggtgtcagtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcccctcttactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcccctcctactggtgtcaggtggtatattatactccataatattcctctcctactggtgtcaggtggtatattatactccataacattcccctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcaggtggtatattatactccataacattcccctcctactggtgtcaggtggtatattatactccaatacattcctctcctactggtgtcaggtggtatattatactccataacattcctctcctactggtgtcagatggtatattatactccataacattcctctcctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2089873 True 990 lncRNA 0.41 2 6033228 6034885

Neighbor

gene id symbol gene type direction distance location
LOC110514830 dock1 coding downstream 34082 5460328 ~ 5999146 (-)
LOC118943912 NA coding downstream 527751 5503698 ~ 5505477 (-)
LOC118943897 LOC106613906 coding downstream 607622 5423399 ~ 5425606 (-)
LOC118943918 NA coding downstream 682800 5340523 ~ 5350428 (-)
LOC118943892 LOC106592985 coding downstream 711993 5172031 ~ 5321235 (-)
LOC110515214 bccip coding upstream 332136 6367021 ~ 6376535 (-)
LOC110510773 LOC106613841 coding upstream 711488 6746373 ~ 6813723 (-)
LOC110518105 LOC106592890 coding upstream 850469 6885354 ~ 6901189 (-)
LOC118943880 gpr26 coding upstream 1362274 7397159 ~ 7409361 (-)
LOC110531557 fbx37 coding upstream 1940034 7974919 ~ 7979808 (-)
G1825146 NA non-coding downstream 7674 6024462 ~ 6025554 (-)
G1825136 NA non-coding downstream 17909 6004534 ~ 6015319 (-)
G1825085 NA non-coding downstream 31882 6001069 ~ 6001346 (-)
G1825080 NA non-coding downstream 42014 5990847 ~ 5991214 (-)
G1825070 NA non-coding downstream 64050 5967368 ~ 5969178 (-)
G1825150 NA non-coding upstream 2900 6037785 ~ 6040242 (-)
G1825152 NA non-coding upstream 8405 6043290 ~ 6058303 (-)
G1825162 NA non-coding upstream 43862 6078747 ~ 6080273 (-)
G1825167 NA non-coding upstream 54432 6089317 ~ 6089646 (-)
G1825170 NA non-coding upstream 72165 6107050 ~ 6107372 (-)
G1825145 NA other downstream 9266 6021536 ~ 6023962 (-)
G1824605 NA other downstream 693327 5338573 ~ 5339901 (-)
G1824563 NA other downstream 785271 5247008 ~ 5247957 (-)
G1824561 NA other downstream 796496 5236377 ~ 5236732 (-)
G1825493 LOC106593079 other upstream 317203 6352088 ~ 6354021 (-)
G1825582 NA other upstream 623233 6658118 ~ 6659951 (-)
G1825658 NA other upstream 788283 6823168 ~ 6825818 (-)
G1825645 LOC106593297 other upstream 891967 6926852 ~ 6943944 (-)
G1826079 NA other upstream 1549679 7584564 ~ 7584977 (-)

Expression


Co-expression Network