G1825474


Basic Information

Item Value
gene id G1825474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 6381717 ~ 6382773 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2090378
gtagagacaacagctgtagtagtagtagagacaacagctgtagtagtagtagagacaacagctgtagtagtagagacaacagctgtagtagtagAGACAACAGCTGTAGTAGTAAAGACAACAGCTGTAGTAGTGGTAGAGacaacagctgtagtagtagagacaacagctgtagtagtagagacaacagctgtagtagtagagacaacagctgtagtagtagagacaacagctgtagtagtagagacaacagctgtagtagtagtagagacaACAGCTGTATAACGActactaaacagaaaacaaacaGTTCCAACGTTCAGTAACACTTTACACCCgtaataaccatgtcctaatatgtcataacagctgacataacatgGTCATAATATGTCATTACAGCTGACATAACatggtcataatatgtcataacagctgacataacatggtcataatatgtcataacagctgacataacatggtcataatatgtcataacagctgacataacatggtcataacactgtcataacagctgacataacatggtcataacactgtcatgacccttatatacatacacacatacatacatacatacatctgtTGTTAAATATagtgtgttattttatggctggttatgacacctacatcaGAGTGTCAAAACCCCACATTCATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2090378 True 680 lncRNA 0.38 3 6381717 6382773

Neighbor

gene id symbol gene type direction distance location
LOC110515214 bccip coding downstream 5182 6367021 ~ 6376535 (-)
LOC110514830 dock1 coding downstream 382571 5460328 ~ 5999146 (-)
LOC118943912 NA coding downstream 876240 5503698 ~ 5505477 (-)
LOC118943897 LOC106613906 coding downstream 956111 5423399 ~ 5425606 (-)
LOC118943918 NA coding downstream 1031289 5340523 ~ 5350428 (-)
LOC110510773 LOC106613841 coding upstream 363600 6746373 ~ 6813723 (-)
LOC110518105 LOC106592890 coding upstream 502581 6885354 ~ 6901189 (-)
LOC118943880 gpr26 coding upstream 1014386 7397159 ~ 7409361 (-)
LOC110531557 fbx37 coding upstream 1592146 7974919 ~ 7979808 (-)
LOC110531799 LOC106577395 coding upstream 1698981 8081754 ~ 8089912 (-)
G1825502 NA non-coding downstream 199 6381060 ~ 6381518 (-)
G1825500 NA non-coding downstream 8970 6370221 ~ 6372747 (-)
G1825487 NA non-coding downstream 12041 6338559 ~ 6369676 (-)
G1825497 LOC106595211 non-coding downstream 16549 6362097 ~ 6365168 (-)
G1825484 NA non-coding downstream 46535 6333781 ~ 6335182 (-)
G1825510 NA non-coding upstream 12715 6395488 ~ 6396066 (-)
G1825514 NA non-coding upstream 30260 6413033 ~ 6413294 (-)
G1825515 NA non-coding upstream 31197 6413970 ~ 6414299 (-)
G1825519 NA non-coding upstream 85574 6468347 ~ 6468607 (-)
G1825532 NA non-coding upstream 103947 6486720 ~ 6487056 (-)
G1825493 LOC106593079 other downstream 27696 6352088 ~ 6354021 (-)
G1825145 NA other downstream 357755 6021536 ~ 6023962 (-)
G1824605 NA other downstream 1041816 5338573 ~ 5339901 (-)
G1824563 NA other downstream 1133760 5247008 ~ 5247957 (-)
G1825582 NA other upstream 275345 6658118 ~ 6659951 (-)
G1825658 NA other upstream 440395 6823168 ~ 6825818 (-)
G1825645 LOC106593297 other upstream 544079 6926852 ~ 6943944 (-)
G1826079 NA other upstream 1201791 7584564 ~ 7584977 (-)
G1826369 NA other upstream 1577066 7959839 ~ 7960824 (-)

Expression


Co-expression Network