Gene
RNA
| Item | Value |
|---|---|
| gene id | G1825387 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 6842917 ~ 6843574 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2090247 | True | 538 | lncRNA | 0.55 | 2 | 6842917 | 6843574 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517872 | LOC106560341 | coding | upstream | 19142 | 6812803 ~ 6823775 (+) |
| LOC118943852 | NA | coding | upstream | 111024 | 6730524 ~ 6731893 (+) |
| LOC118943851 | LOC104925227 | coding | upstream | 112492 | 6659380 ~ 6730425 (+) |
| LOC110515887 | mmp21 | coding | upstream | 428568 | 6398501 ~ 6414349 (+) |
| uros | hem4 | coding | upstream | 448683 | 6376624 ~ 6394234 (+) |
| LOC110516215 | LOC106593297 | coding | downstream | 64496 | 6908070 ~ 6943623 (+) |
| LOC110518744 | LOC106592094 | coding | downstream | 336515 | 7180089 ~ 7218167 (+) |
| LOC110514524 | cpxm2 | coding | downstream | 394423 | 7237997 ~ 7363219 (+) |
| LOC110510387 | LOC105903359 | coding | downstream | 936967 | 7780541 ~ 7857128 (+) |
| LOC110531553 | LOC106577309 | coding | downstream | 1136325 | 7979624 ~ 7982233 (+) |
| G1825388 | NA | non-coding | upstream | 26542 | 6816006 ~ 6816375 (+) |
| G1825376 | NA | non-coding | upstream | 51676 | 6788933 ~ 6791241 (+) |
| G1825374 | NA | non-coding | upstream | 61746 | 6779893 ~ 6781171 (+) |
| G1825354 | NA | non-coding | upstream | 100233 | 6742198 ~ 6742684 (+) |
| G1825386 | LOC100194703 | non-coding | downstream | 24985 | 6868559 ~ 6869006 (+) |
| G1825399 | LOC106577407 | non-coding | downstream | 40389 | 6883963 ~ 6886112 (+) |
| G1825401 | NA | non-coding | downstream | 44877 | 6888451 ~ 6888961 (+) |
| G1825407 | NA | non-coding | downstream | 53516 | 6897090 ~ 6897501 (+) |
| G1825417 | NA | non-coding | downstream | 63287 | 6906861 ~ 6907484 (+) |
| LOC118943860 | LOC106577385 | other | upstream | 765436 | 6005814 ~ 6077481 (+) |
| G1824861 | NA | other | upstream | 958602 | 5883803 ~ 5884315 (+) |
| G1824784 | NA | other | upstream | 1122176 | 5720223 ~ 5720741 (+) |
| G1824676 | LOC106593814 | other | upstream | 1355869 | 5478113 ~ 5487048 (+) |
| G1825869 | NA | other | downstream | 392880 | 7236454 ~ 7236902 (+) |
| G1826407 | NA | other | downstream | 1176787 | 8020361 ~ 8020914 (+) |
| G1826455 | NA | other | downstream | 1296007 | 8139581 ~ 8141676 (+) |
| LOC110515875 | spock2 | other | downstream | 1321849 | 8165316 ~ 8278334 (+) |
