Gene
RNA
| Item | Value |
|---|---|
| gene id | G1825430 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 6980267 ~ 6980522 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2090310 | True | 256 | lncRNA | 0.41 | 1 | 6980267 | 6980522 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516215 | LOC106593297 | coding | upstream | 36644 | 6908070 ~ 6943623 (+) |
| LOC110510774 | fa53b | coding | upstream | 116647 | 6833119 ~ 6863620 (+) |
| LOC110517872 | LOC106560341 | coding | upstream | 156492 | 6812803 ~ 6823775 (+) |
| LOC118943852 | NA | coding | upstream | 248374 | 6730524 ~ 6731893 (+) |
| LOC118943851 | LOC104925227 | coding | upstream | 249842 | 6659380 ~ 6730425 (+) |
| LOC110518744 | LOC106592094 | coding | downstream | 199567 | 7180089 ~ 7218167 (+) |
| LOC110514524 | cpxm2 | coding | downstream | 257475 | 7237997 ~ 7363219 (+) |
| LOC110510387 | LOC105903359 | coding | downstream | 800019 | 7780541 ~ 7857128 (+) |
| LOC110531553 | LOC106577309 | coding | downstream | 999377 | 7979624 ~ 7982233 (+) |
| LOC118936587 | LOC106577308 | coding | downstream | 1002211 | 7982733 ~ 7991142 (+) |
| G1825410 | NA | non-coding | upstream | 34333 | 6944977 ~ 6945934 (+) |
| G1825420 | NA | non-coding | upstream | 55624 | 6924264 ~ 6924643 (+) |
| G1825417 | NA | non-coding | upstream | 72783 | 6906861 ~ 6907484 (+) |
| G1825407 | NA | non-coding | upstream | 82766 | 6897090 ~ 6897501 (+) |
| G1825401 | NA | non-coding | upstream | 91306 | 6888451 ~ 6888961 (+) |
| G1825431 | NA | non-coding | downstream | 89 | 6980611 ~ 6980884 (+) |
| G1825435 | NA | non-coding | downstream | 10047 | 6990569 ~ 6991052 (+) |
| G1825440 | NA | non-coding | downstream | 21782 | 7002304 ~ 7002514 (+) |
| G1825710 | NA | non-coding | downstream | 35124 | 7015646 ~ 7015917 (+) |
| G1825711 | NA | non-coding | downstream | 36704 | 7017226 ~ 7023666 (+) |
| G1825399 | LOC106577407 | other | upstream | 94155 | 6883963 ~ 6886112 (+) |
| uros | hem4 | other | upstream | 586067 | 6376624 ~ 6394234 (+) |
| LOC118943860 | LOC106577385 | other | upstream | 902786 | 6005814 ~ 6077481 (+) |
| G1824861 | NA | other | upstream | 1095952 | 5883803 ~ 5884315 (+) |
| G1824784 | NA | other | upstream | 1259526 | 5720223 ~ 5720741 (+) |
| G1825869 | NA | other | downstream | 255932 | 7236454 ~ 7236902 (+) |
| G1826407 | NA | other | downstream | 1039839 | 8020361 ~ 8020914 (+) |
| G1826455 | NA | other | downstream | 1159059 | 8139581 ~ 8141676 (+) |
| LOC110515875 | spock2 | other | downstream | 1184901 | 8165316 ~ 8278334 (+) |
| LOC110513446 | LOC106577352 | other | downstream | 1529261 | 8508022 ~ 8654135 (+) |
