XLOC_037542


Basic Information

Item Value
gene id XLOC_037542
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 772863 ~ 773656 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075254
GAGAGGTGAAGGTCTGGAAACAAGGAAGTGCAATGTGCACTTAAACAAAATGGACTTTAACTGTCAGACTCCAGGTTAGACACCCAACCTGTAAAAAATCAACCTGCCAGACAAGCACTCAAATGAAGGAACAAAGCAAGCAAGAGTAAAACCAGCAGAAAGACACCGCAAGAGAGGGTAATTTGCATTTTGCTGTTGTCATTGTTTTGTTTAGCCTGTAAGTTCCTCTATCTAACTGTTGTACGTTTCAAACATTGAGCTGAATGTTTGCCTgtcggtgctaacatgtttgtttCATGATTTACAAGCACAAAAAGCAGcttaaaattaaaacagaaacaaatctgACATCTCTGTATCTTTCTCTGCCTCTCTTGTTGCTTTCACTGTTTTATGAACAAGCCGCAAAAAGGAAGGAAGAAGTTTGTaacagtgagtgagagagagagggagggacgAACGACAGGCATATATATGCTGTCAGGACGACCGGCTCTTCTAAGCACAGAATACCCTGTTTACGTGTCGAGACAGAAGGAGAAGCCGAGGGCAGGTATGAAGCCGCTAGACTAATGATTATGGGCTGTGGTTGGTTGCACTGCACTGGGTATAGACAGAGGGGGGCAAGAGGAAAAACTAGAGGATGAGTGCAAACACATGACACCACTGTactggatgagtgtgtgtgtgtgtgcctcttTCACATATATATATTACCATACTAACATGCATTCAATTCTTTCTCTTTTCGACTGGAAGAGGAACATTTGAAAAGGGAAGATGGTTCGGTAAGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075254 True 794 lncRNA 0.43 1 772863 773656

Neighbor

gene id symbol gene type direction distance location
XLOC_037541 NA coding downstream 14447 757593 ~ 758416 (-)
XLOC_037540 ndufb3 coding downstream 26546 707086 ~ 746317 (-)
XLOC_037539 cflarb coding downstream 68196 701452 ~ 704667 (-)
XLOC_037538 dip2a coding downstream 77863 584940 ~ 695000 (-)
XLOC_037537 si:dkey-11f4.16 coding downstream 302766 461143 ~ 470097 (-)
XLOC_037543 en1a coding upstream 5089 778745 ~ 785444 (-)
XLOC_037544 marco coding upstream 21953 795609 ~ 813693 (-)
XLOC_037545 c1ql2 coding upstream 70565 844221 ~ 849069 (-)
XLOC_037546 NA coding upstream 107092 880748 ~ 889567 (-)
XLOC_037547 C9H2orf76 coding upstream 126736 900392 ~ 904227 (-)
XLOC_037533 NA non-coding downstream 335060 434375 ~ 437803 (-)
XLOC_037532 CR753874.2 non-coding downstream 358375 407678 ~ 414488 (-)
XLOC_037520 NA non-coding downstream 523430 228667 ~ 249433 (-)
XLOC_037521 NA non-coding downstream 523878 243961 ~ 248985 (-)
XLOC_037549 CABZ01066922.1 non-coding upstream 229785 1003441 ~ 1003555 (-)
XLOC_037550 NA non-coding upstream 253359 1027015 ~ 1028650 (-)
XLOC_037551 NA non-coding upstream 404245 1177901 ~ 1181454 (-)
XLOC_037554 NA non-coding upstream 529281 1302937 ~ 1305423 (-)

Expression


Co-expression Network