XLOC_037550



Basic Information


Item Value
gene id XLOC_037550
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 1027015 ~ 1028650 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00075255
ccaccgtgccgcccgagtttaattatattttaataaacactaatcttatgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtgtgtgtacctgtggaAGCAGTATTCGCTCTCCGTCCTGAAGTAGTAGACGTGAGACTTGAACTGCAGCTTGAAGACGTGATCTTTGTGGATGATGTCTGTGTGTGCGGCGTCTGAGACTGAATAACCCAGCAGAGGCAGACTGGCCAGAGGATACTCATCCTGACAaagacacaacacacacactgatgagaTCTATGCGGcatggtgtgtgtgcgtgtatattcgagagagtgagtgtgtaatCTTTACCTCACGTGTTTTGTAGAAGAACAGGGTGAAGTTGATGAAGACGACCCAGAGTTTCTGCCAGCCGTTGCTATTTTTAAACTTTCTGAGCAGATTTCCTGAGAGATGATTctccgtgGCTCTGATGAAGTCCAGCATGGAGACGCTGGTGTTGCGGTGCCAGCAGACGTGTGCTGTGGTGTTTCCTCGATGGACAGAGTTTGAGGAGCTCTTACCGTTCTTCGTTAAAGACGTTCGAGAGCCGCAAAGATCATCTTCAGACTCCACATCAGACGACTCTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00075255 True 636 lncRNA 0.48 2 1027015 1028650

Neighbor


gene id symbol gene type direction distance location
XLOC_037549 CABZ01066922.1 coding downstream 23460 1003441 ~ 1003555 (-)
XLOC_037548 sctr coding downstream 77011 925969 ~ 950004 (-)
XLOC_037547 C9H2orf76 coding downstream 122788 900392 ~ 904227 (-)
XLOC_037546 NA coding downstream 137448 880748 ~ 889567 (-)
XLOC_037545 c1ql2 coding downstream 177946 844221 ~ 849069 (-)
XLOC_037551 NA coding upstream 149251 1177901 ~ 1181454 (-)
XLOC_037552 ino80da coding upstream 159155 1187805 ~ 1200187 (-)
XLOC_037553 gpr1 coding upstream 207128 1235778 ~ 1236848 (-)
XLOC_037554 NA coding upstream 274287 1302937 ~ 1305423 (-)
XLOC_037555 FP102120.4 coding upstream 350726 1379376 ~ 1379490 (-)
XLOC_037542 NA non-coding downstream 253359 772863 ~ 773656 (-)
XLOC_037541 NA non-coding downstream 268599 757593 ~ 758416 (-)
XLOC_037533 NA non-coding downstream 589212 434375 ~ 437803 (-)
XLOC_037558 NA non-coding upstream 435119 1463769 ~ 1780381 (-)
XLOC_037561 CU104777.1 non-coding upstream 613955 1642605 ~ 1649744 (-)

Expression



Co-expression Network