G1827249



Basic Information


Item Value
gene id G1827249
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 8846624 ~ 8898772 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2092850
TGTATGTAGGCCGACATGTTTTTAATCAATGCTCAACATTTCAccatgaaaatcatattttatgAAACACAGGAAATTGACAAGACTTTGGTCTTGTTTATTCAGCCTCTTTTCCCTGTAAGAAGAAAGAAATaacagaatggatcagtattaataatgaacatgataattGTATCAACACTTGGTAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATAACAGAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGAAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATaacagaatggatcagtattaataatgaacatgataaatatatcaaCACTTGGTAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATaacagaatggatcagtattaataatgaacatgataaatatatcaaCACTTGGTAATaacagaatggatcagtattaataatgaacatgataattATATCAACACTTGGTAATAACAGAATGCATCAAGTATTTAAGACTCTGTGCTCAGCTTGATTTTTCATTAACCTTTtataaagaaaaatgtattttaaccTGTCCTGAATTTTATCTCAGTGATCTTAAATACATTTGAGTAATTGTAAAACATCAGTATTGACCTCTGTGAAGAATGAATCATaggtggtgttgatgtggtcATGTTTGAACATCAGTCAGGTGTAGGTTTAGCAGCACTTCTATACCTTTCCAGAGTCACGGGTCTTGGCTCTGAGCTTGTTGACCTGAGTCTCAGCGATGTCAGCACGCTCCTCAGCCTCTTCCAGCTCATTCTGAACCTTCCGGAACTTAGACATGTGCTGGTTGGATGCTTCCTC

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2092850 True 1287 lncRNA 0.30 2 8846624 8898772

Neighbor


gene id symbol gene type direction distance location
LOC118943825 polr3a coding downstream 33511 8736063 ~ 8813113 (-)
star2 LOC106577426 coding downstream 169606 8665409 ~ 8677018 (-)
LOC110515815 LOC106594691 coding downstream 526886 8315622 ~ 8319738 (-)
LOC118936473 LOC106594692 coding downstream 532249 8303445 ~ 8314375 (-)
LOC118943919 LOC106560865 coding downstream 543209 8290470 ~ 8303415 (-)
LOC118943828 LOC106564289 coding upstream 5102 8903874 ~ 8916388 (-)
dpysl4 dpysl4 coding upstream 99668 8998440 ~ 9035634 (-)
jakmip3 LOC106577179 coding upstream 150428 9049200 ~ 9133856 (-)
LOC110532938 LOC105009682 coding upstream 280914 9179686 ~ 9209336 (-)
LOC110512783 tcerg1l coding upstream 507265 9406037 ~ 9611812 (-)
G1827248 NA non-coding downstream 1887 8844430 ~ 8844737 (-)
G1827224 NA non-coding downstream 29567 8816684 ~ 8817057 (-)
G1827219 NA non-coding downstream 38896 8807447 ~ 8807728 (-)
G1827215 NA non-coding downstream 59114 8786753 ~ 8787510 (-)
G1827210 NA non-coding downstream 84967 8759927 ~ 8761657 (-)
G1827260 NA non-coding upstream 23771 8922543 ~ 8948326 (-)
G1827263 NA non-coding upstream 35230 8934002 ~ 8934561 (-)
G1827269 NA non-coding upstream 54298 8953070 ~ 8956162 (-)
G1827276 LOC106577419 non-coding upstream 66526 8965298 ~ 8969993 (-)
G1827285 LOC106577418 non-coding upstream 91507 8990279 ~ 8991646 (-)
G1826594 NA other downstream 699620 8143183 ~ 8147004 (-)
G1826369 NA other downstream 885800 7959839 ~ 7960824 (-)
G1826079 NA other downstream 1261647 7584564 ~ 7584977 (-)
G1825645 LOC106593297 other downstream 1919280 6926852 ~ 6943944 (-)
G1825658 NA other downstream 2020806 6823168 ~ 6825818 (-)
G1827339 NA other upstream 260425 9159197 ~ 9159615 (-)
G1827656 NA other upstream 567298 9466070 ~ 9466490 (-)
G1827690 NA other upstream 645611 9544383 ~ 9544973 (-)

Expression



Co-expression Network