G1827611



Basic Information


Item Value
gene id G1827611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 9458494 ~ 9459584 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2093327
CAGTCATGCAGTTCAACCCACACATCCCGTTCTGTTCTGTAATTACCAAAACACATTTAGCTGAACGTAGATTCAAAAAGGGGCTTTGGTCATTTTATTTGTGAGAAACTATATACTTAACTCACAGTGATAAAACCAACGTCATTTCCATTGTGTTgtatagtctagtgttaccattgtgatatagtgttaccattgtgttatatagtctagtgttaccattgtgttatatagtctagtgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2093327 True 242 lncRNA 0.35 2 9458494 9459584

Neighbor


gene id symbol gene type direction distance location
LOC110532938 LOC105009682 coding downstream 249158 9179686 ~ 9209336 (-)
jakmip3 LOC106577179 coding downstream 324638 9049200 ~ 9133856 (-)
dpysl4 dpysl4 coding downstream 422860 8998440 ~ 9035634 (-)
LOC118943828 LOC106564289 coding downstream 542106 8903874 ~ 8916388 (-)
LOC110532987 LOC106596646 coding downstream 600963 8838876 ~ 8945963 (-)
LOC110531428 glrx3 coding upstream 422459 9882043 ~ 9914708 (-)
LOC110502268 LOC106604541 coding upstream 680513 10140097 ~ 10154289 (-)
LOC110502266 LOC106604534 coding upstream 700895 10160479 ~ 10206199 (-)
LOC110502265 LOC106604528 coding upstream 749917 10209501 ~ 10216489 (-)
LOC110502263 LOC106604517 coding upstream 802482 10262066 ~ 10308838 (-)
G1827649 NA non-coding downstream 9337 9448702 ~ 9449157 (-)
G1827645 NA non-coding downstream 15613 9440113 ~ 9442881 (-)
G1827639 NA non-coding downstream 29369 9428801 ~ 9429125 (-)
G1827621 NA non-coding downstream 70268 9387882 ~ 9388226 (-)
G1827617 NA non-coding downstream 76288 9381355 ~ 9382206 (-)
G1827655 NA non-coding upstream 5911 9465495 ~ 9465745 (-)
G1827674 NA non-coding upstream 50644 9510228 ~ 9510643 (-)
G1827679 NA non-coding upstream 56085 9515669 ~ 9515910 (-)
G1827684 NA non-coding upstream 67845 9527429 ~ 9527650 (-)
G1827687 NA non-coding upstream 80575 9540159 ~ 9540714 (-)
LOC110512783 tcerg1l other downstream 33013 9406037 ~ 9611812 (-)
G1827339 NA other downstream 298879 9159197 ~ 9159615 (-)
G1827228 NA other downstream 509855 8842602 ~ 8948639 (-)
G1827656 NA other upstream 6486 9466070 ~ 9466490 (-)
G1827690 NA other upstream 84799 9544383 ~ 9544973 (-)
G1827761 NA other upstream 228873 9688457 ~ 9688844 (-)
G1829417 LOC106604325 other upstream 1743483 11203067 ~ 11203996 (-)
G1829918 NA other upstream 2273846 11733430 ~ 11733926 (-)

Expression



Co-expression Network