G1827687


Basic Information

Item Value
gene id G1827687
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 9540159 ~ 9540714 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2093420
CCTTCTGTGGTAACACAACATTAAATACAAAGAGTCTAACTACACTTTCTCTGGTAACACAATATCAGGCACAAAGAGTCTAGCTACACCTTCTGTGGTAACACAATATCAGGCACAGAGAGTCTAGCTACATCTTCTGTGGTAACACAATATCAGGACACAAATAGTCTAGCTACTCCTTCTGTGGTAACACAACATTAAATACAAGGAGTCTAACTACACTTTCTGTGGTAACACAATATCAGGCacaaagagtctagctacatcTTCTGTGGTAACACAATATCAGGACACAAAGAGTCTAGCTACTCCTTCTGTGGTAACACAACATTAAATACAAAGAGTCTAACTACACCTTCTGTGGTAACACAATATCAGGCACAAAGAGTCTAGCTACACCTTCTGTGGTAACACAATATCAGGCACAAAGAGTCTAGCTACACCTTCTGTGGTAACACAATATCAGGCACAAAGAGTCTAGCTACACCTTCTGTGGTAACACAATATCAGTATTGTGTATTAAGGGCCTCTTCGTAACACCCCCAGTCAGTTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2093420 True 556 lncRNA 0.40 1 9540159 9540714

Neighbor

gene id symbol gene type direction distance location
LOC110532938 LOC105009682 coding downstream 330823 9179686 ~ 9209336 (-)
jakmip3 LOC106577179 coding downstream 406303 9049200 ~ 9133856 (-)
dpysl4 dpysl4 coding downstream 504525 8998440 ~ 9035634 (-)
LOC118943828 LOC106564289 coding downstream 623771 8903874 ~ 8916388 (-)
LOC110532987 LOC106596646 coding downstream 682628 8838876 ~ 8945963 (-)
LOC110531428 glrx3 coding upstream 341329 9882043 ~ 9914708 (-)
LOC110502268 LOC106604541 coding upstream 599383 10140097 ~ 10154289 (-)
LOC110502266 LOC106604534 coding upstream 619765 10160479 ~ 10206199 (-)
LOC110502265 LOC106604528 coding upstream 668787 10209501 ~ 10216489 (-)
LOC110502263 LOC106604517 coding upstream 721352 10262066 ~ 10308838 (-)
G1827684 NA non-coding downstream 12509 9527429 ~ 9527650 (-)
G1827679 NA non-coding downstream 24249 9515669 ~ 9515910 (-)
G1827674 NA non-coding downstream 29516 9510228 ~ 9510643 (-)
G1827655 NA non-coding downstream 74414 9465495 ~ 9465745 (-)
G1827611 NA non-coding downstream 80575 9458494 ~ 9459584 (-)
G1827696 NA non-coding upstream 16690 9557404 ~ 9557655 (-)
G1827699 NA non-coding upstream 19966 9560680 ~ 9560998 (-)
G1827703 NA non-coding upstream 25139 9565853 ~ 9566059 (-)
G1827705 NA non-coding upstream 29432 9570146 ~ 9570376 (-)
G1827731 NA non-coding upstream 88838 9629552 ~ 9630386 (-)
G1827656 NA other downstream 73669 9466070 ~ 9466490 (-)
LOC110512783 tcerg1l other downstream 114678 9406037 ~ 9611812 (-)
G1827339 NA other downstream 380544 9159197 ~ 9159615 (-)
G1827690 NA other upstream 3669 9544383 ~ 9544973 (-)
G1827761 NA other upstream 147743 9688457 ~ 9688844 (-)
G1829417 LOC106604325 other upstream 1662353 11203067 ~ 11203996 (-)
G1829918 NA other upstream 2192716 11733430 ~ 11733926 (-)
LOC118943913 drgx other upstream 2259969 11798161 ~ 11807866 (-)

Expression


Co-expression Network