G1828008


Basic Information

Item Value
gene id G1828008
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 9996882 ~ 9997382 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2093792
AGGTGCTAGGAGACCAACACTACTAAGACaagactggatacattgttactaagacaggactggatacattgttactaagacaagactggatacattgttactaagacaggactgttttctcctctccagagaggagggctggatacattgttactaagacaggactggatacattgttactaagacaggactggatacattgttactaagacaagactggatacattgttactaagacaggactgttttctcctctccagagaggagggctggatacattgttactaagacaggactgttttctcctctccagagaggagggttggatacattgttactaagacaagactggatacattgttactaagacaagactggatacattgttactaagacaagactggatacattgttactaagacaagactggatacattgttactaagacaggactgttttctcctctccagagaggagggctggatacattgttactaagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2093792 True 501 lncRNA 0.41 1 9996882 9997382

Neighbor

gene id symbol gene type direction distance location
LOC110531428 glrx3 coding downstream 82174 9882043 ~ 9914708 (-)
LOC110512783 tcerg1l coding downstream 385070 9406037 ~ 9611812 (-)
LOC110532938 LOC105009682 coding downstream 787546 9179686 ~ 9209336 (-)
jakmip3 LOC106577179 coding downstream 863026 9049200 ~ 9133856 (-)
dpysl4 dpysl4 coding downstream 961248 8998440 ~ 9035634 (-)
LOC110502268 LOC106604541 coding upstream 142715 10140097 ~ 10154289 (-)
LOC110502266 LOC106604534 coding upstream 163097 10160479 ~ 10206199 (-)
LOC110502265 LOC106604528 coding upstream 212119 10209501 ~ 10216489 (-)
LOC110502263 LOC106604517 coding upstream 264684 10262066 ~ 10308838 (-)
LOC110502262 LOC106604523 coding upstream 313394 10310776 ~ 10328183 (-)
G1828004 NA non-coding downstream 3036 9993628 ~ 9993846 (-)
G1827999 NA non-coding downstream 7508 9989124 ~ 9989374 (-)
G1827995 NA non-coding downstream 10467 9986213 ~ 9986415 (-)
G1827979 NA non-coding downstream 30472 9966176 ~ 9966410 (-)
G1827969 NA non-coding downstream 44352 9952327 ~ 9952530 (-)
G1828012 NA non-coding upstream 3159 10000541 ~ 10002289 (-)
G1828014 NA non-coding upstream 6310 10003692 ~ 10004038 (-)
G1828016 NA non-coding upstream 8995 10006377 ~ 10006625 (-)
G1828046 NA non-coding upstream 16942 10014324 ~ 10052161 (-)
G1828052 LOC106595915 non-coding upstream 38135 10035517 ~ 10061525 (-)
G1827761 NA other downstream 308038 9688457 ~ 9688844 (-)
G1827690 NA other downstream 451909 9544383 ~ 9544973 (-)
G1827656 NA other downstream 530392 9466070 ~ 9466490 (-)
G1827339 NA other downstream 837267 9159197 ~ 9159615 (-)
G1829417 LOC106604325 other upstream 1205685 11203067 ~ 11203996 (-)
G1829918 NA other upstream 1736048 11733430 ~ 11733926 (-)
LOC118943913 drgx other upstream 1803301 11798161 ~ 11807866 (-)
LOC110502234 LOC106604225 other upstream 1920697 11907827 ~ 11953940 (-)
LOC110502269 LOC106604550 other upstream 2395581 12392924 ~ 12411810 (-)

Expression


Co-expression Network