Gene
RNA
| Item | Value |
|---|---|
| gene id | G1828016 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 10006377 ~ 10006625 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2093802 | True | 249 | lncRNA | 0.43 | 1 | 10006377 | 10006625 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531428 | glrx3 | coding | downstream | 91669 | 9882043 ~ 9914708 (-) |
| LOC110512783 | tcerg1l | coding | downstream | 394565 | 9406037 ~ 9611812 (-) |
| LOC110532938 | LOC105009682 | coding | downstream | 797041 | 9179686 ~ 9209336 (-) |
| jakmip3 | LOC106577179 | coding | downstream | 872521 | 9049200 ~ 9133856 (-) |
| dpysl4 | dpysl4 | coding | downstream | 970743 | 8998440 ~ 9035634 (-) |
| LOC110502268 | LOC106604541 | coding | upstream | 133472 | 10140097 ~ 10154289 (-) |
| LOC110502266 | LOC106604534 | coding | upstream | 153854 | 10160479 ~ 10206199 (-) |
| LOC110502265 | LOC106604528 | coding | upstream | 202876 | 10209501 ~ 10216489 (-) |
| LOC110502263 | LOC106604517 | coding | upstream | 255441 | 10262066 ~ 10308838 (-) |
| LOC110502262 | LOC106604523 | coding | upstream | 304151 | 10310776 ~ 10328183 (-) |
| G1828014 | NA | non-coding | downstream | 2339 | 10003692 ~ 10004038 (-) |
| G1828012 | NA | non-coding | downstream | 4088 | 10000541 ~ 10002289 (-) |
| G1828008 | NA | non-coding | downstream | 8995 | 9996882 ~ 9997382 (-) |
| G1828004 | NA | non-coding | downstream | 12531 | 9993628 ~ 9993846 (-) |
| G1827999 | NA | non-coding | downstream | 17003 | 9989124 ~ 9989374 (-) |
| G1828046 | NA | non-coding | upstream | 7699 | 10014324 ~ 10052161 (-) |
| G1828052 | LOC106595915 | non-coding | upstream | 28892 | 10035517 ~ 10061525 (-) |
| G1828066 | NA | non-coding | upstream | 105616 | 10112241 ~ 10126480 (-) |
| G1828083 | NA | non-coding | upstream | 131193 | 10137818 ~ 10138528 (-) |
| G1827761 | NA | other | downstream | 317533 | 9688457 ~ 9688844 (-) |
| G1827690 | NA | other | downstream | 461404 | 9544383 ~ 9544973 (-) |
| G1827656 | NA | other | downstream | 539887 | 9466070 ~ 9466490 (-) |
| G1827339 | NA | other | downstream | 846762 | 9159197 ~ 9159615 (-) |
| G1829417 | LOC106604325 | other | upstream | 1196442 | 11203067 ~ 11203996 (-) |
| G1829918 | NA | other | upstream | 1726805 | 11733430 ~ 11733926 (-) |
| LOC118943913 | drgx | other | upstream | 1794058 | 11798161 ~ 11807866 (-) |
| LOC110502234 | LOC106604225 | other | upstream | 1911454 | 11907827 ~ 11953940 (-) |
| LOC110502269 | LOC106604550 | other | upstream | 2386338 | 12392924 ~ 12411810 (-) |
