G1828046


Basic Information

Item Value
gene id G1828046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 10014324 ~ 10052161 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2093842
aggttctggatccactcccgtgctgcccacaggtccagaggcccacaggtccagcctatatgtgactgtgactatatgtgactgtaaccctgatatggtaaggttctggatccactcccgtgctgcccacaggtccagaggcccacaggtccagcctatatgtgactgtaaccctgatatggtaaggtgagtgatggggtgctcctggaagtgggttatgagttccgtttgtaggtgtgcccttttaatgttatacaggtgttgtttgagtctggtttctatggtgtgtttggtttctccaatgtattgtttattgcaaagtgtacatgtaattatataaatggtgttatgtgtgttcaatgaataggattcttgtactggtgctgatgtgtggctgtgtatatttgtaatgacctttatctgtcgaaaatggaaattatgaggtttgaggtcttgtggtggcttactactgaatcttgctttggtgaggag

Function

NR:

description
hypothetical protein EH28_00382

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2093842 True 492 lncRNA 0.45 2 10014324 10052161

Neighbor

gene id symbol gene type direction distance location
LOC110531428 glrx3 coding downstream 99616 9882043 ~ 9914708 (-)
LOC110512783 tcerg1l coding downstream 402512 9406037 ~ 9611812 (-)
LOC110532938 LOC105009682 coding downstream 804988 9179686 ~ 9209336 (-)
jakmip3 LOC106577179 coding downstream 880468 9049200 ~ 9133856 (-)
dpysl4 dpysl4 coding downstream 978690 8998440 ~ 9035634 (-)
LOC110502268 LOC106604541 coding upstream 87936 10140097 ~ 10154289 (-)
LOC110502266 LOC106604534 coding upstream 108318 10160479 ~ 10206199 (-)
LOC110502265 LOC106604528 coding upstream 157340 10209501 ~ 10216489 (-)
LOC110502263 LOC106604517 coding upstream 209905 10262066 ~ 10308838 (-)
LOC110502262 LOC106604523 coding upstream 258615 10310776 ~ 10328183 (-)
G1828016 NA non-coding downstream 7699 10006377 ~ 10006625 (-)
G1828014 NA non-coding downstream 10286 10003692 ~ 10004038 (-)
G1828012 NA non-coding downstream 12035 10000541 ~ 10002289 (-)
G1828008 NA non-coding downstream 16942 9996882 ~ 9997382 (-)
G1828004 NA non-coding downstream 20478 9993628 ~ 9993846 (-)
G1828066 NA non-coding upstream 60080 10112241 ~ 10126480 (-)
G1828083 NA non-coding upstream 85657 10137818 ~ 10138528 (-)
G1828262 NA non-coding upstream 126032 10178193 ~ 10178408 (-)
G1828263 NA non-coding upstream 126424 10178585 ~ 10178824 (-)
G1827761 NA other downstream 325480 9688457 ~ 9688844 (-)
G1827690 NA other downstream 469351 9544383 ~ 9544973 (-)
G1827656 NA other downstream 547834 9466070 ~ 9466490 (-)
G1827339 NA other downstream 854709 9159197 ~ 9159615 (-)
G1829417 LOC106604325 other upstream 1150906 11203067 ~ 11203996 (-)
G1829918 NA other upstream 1681269 11733430 ~ 11733926 (-)
LOC118943913 drgx other upstream 1748522 11798161 ~ 11807866 (-)
LOC110502234 LOC106604225 other upstream 1865918 11907827 ~ 11953940 (-)
LOC110502269 LOC106604550 other upstream 2340802 12392924 ~ 12411810 (-)

Expression


Co-expression Network