G1828128


Basic Information

Item Value
gene id G1828128
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 10194271 ~ 10194709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2093929
gtctactggtagcgcctccatgctctggacactacgctgacagacacagcaaatattcttgccacagctcgcattgatgtgccatcctggatgagctgcactacttgagccacttgtgtgggttgtagactccgtctcatgctaccactagagtgaaagcaccgccagcattcaaaagtgaccaaaacatcagccaggaagcataggaactgagaagtggtctgtggttatcacctgcagaaccactcctttattgggggtgtcttgctaattgcctataatttccacctgttgtctattccatttgcacaacagcatgtgaaatttattgtcagtgttgcttcctaagtggacagtttgatttcacagaagtgtgattgacttggagttacattgtgttgtttaagtgttccctttatttttttgagcagtgtatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2093929 True 439 lncRNA 0.44 1 10194271 10194709

Neighbor

gene id symbol gene type direction distance location
LOC110531625 LOC106577355 coding upstream 229937 9957640 ~ 9964334 (+)
LOC118943871 NA coding upstream 829515 9364151 ~ 9364756 (+)
LOC118943920 NA coding upstream 830415 9347390 ~ 9363856 (+)
LOC118943850 LOC106560822 coding upstream 1019874 9161595 ~ 9174397 (+)
LOC110531835 LOC106577418 coding upstream 1199211 8986646 ~ 8995060 (+)
LOC110502264 tiar coding downstream 25088 10219797 ~ 10241910 (+)
LOC118943896 NA coding downstream 238222 10432931 ~ 10439338 (+)
LOC110502253 LOC106604458 coding downstream 296701 10491410 ~ 10506579 (+)
LOC110502256 NA coding downstream 298060 10492769 ~ 10494292 (+)
LOC110502251 hps6 coding downstream 728850 10923559 ~ 10930057 (+)
G1828126 NA non-coding upstream 1287 10192557 ~ 10192984 (+)
G1828125 NA non-coding upstream 2015 10192039 ~ 10192256 (+)
G1828113 NA non-coding upstream 9725 10184299 ~ 10184546 (+)
G1828111 NA non-coding upstream 11094 10182919 ~ 10183177 (+)
G1828110 NA non-coding upstream 12034 10181737 ~ 10182237 (+)
G1828132 NA non-coding downstream 4308 10199017 ~ 10199258 (+)
G1828186 NA non-coding downstream 115189 10309898 ~ 10310113 (+)
G1828168 NA non-coding downstream 118640 10313349 ~ 10317196 (+)
G1828217 NA non-coding downstream 158354 10353063 ~ 10353262 (+)
G1828237 NA non-coding downstream 185982 10380691 ~ 10380935 (+)
G1828033 NA other upstream 127959 10035682 ~ 10066312 (+)
G1827493 NA other upstream 764139 9428744 ~ 9430132 (+)
LOC110531721 LOC106595486 other upstream 1348686 8829711 ~ 8904592 (+)
G1828208 LOC106604487 other downstream 199769 10394478 ~ 10402171 (+)
LOC110502248 pprc1 other downstream 860399 11030762 ~ 11070120 (+)
G1829089 NA other downstream 1016988 11211697 ~ 11220145 (+)
G1829147 NA other downstream 1082168 11276877 ~ 11278445 (+)
G1829155 NA other downstream 1092781 11287490 ~ 11288151 (+)

Expression


Co-expression Network