Gene
RNA
| Item | Value |
|---|---|
| gene id | G1828365 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 10387596 ~ 10387927 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2094189 | True | 332 | lncRNA | 0.42 | 1 | 10387596 | 10387927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502261 | LOC106604510 | coding | downstream | 23093 | 10356692 ~ 10364503 (-) |
| LOC110503047 | NA | coding | downstream | 44391 | 10338539 ~ 10343205 (-) |
| LOC110502262 | LOC106604523 | coding | downstream | 59413 | 10310776 ~ 10328183 (-) |
| LOC110502263 | LOC106604517 | coding | downstream | 78758 | 10262066 ~ 10308838 (-) |
| LOC110502265 | LOC106604528 | coding | downstream | 171107 | 10209501 ~ 10216489 (-) |
| LOC110502259 | LOC106604487 | coding | upstream | 8413 | 10396340 ~ 10425115 (-) |
| LOC110502258 | lrrfip2 | coding | upstream | 69386 | 10457313 ~ 10470536 (-) |
| cutc | cutc | coding | upstream | 98156 | 10486083 ~ 10492607 (-) |
| LOC110502255 | kcnip2 | coding | upstream | 118860 | 10506787 ~ 10603546 (-) |
| LOC118943886 | NA | coding | upstream | 228918 | 10616845 ~ 10734529 (-) |
| G1828357 | NA | non-coding | downstream | 12920 | 10373745 ~ 10374676 (-) |
| G1828263 | NA | non-coding | downstream | 208772 | 10178585 ~ 10178824 (-) |
| G1828262 | NA | non-coding | downstream | 209188 | 10178193 ~ 10178408 (-) |
| LOC110502266 | LOC106604534 | non-coding | downstream | 222221 | 10160479 ~ 10206199 (-) |
| G1828083 | NA | non-coding | downstream | 249068 | 10137818 ~ 10138528 (-) |
| G1828561 | NA | non-coding | upstream | 55142 | 10443069 ~ 10443358 (-) |
| G1828562 | NA | non-coding | upstream | 55677 | 10443604 ~ 10444469 (-) |
| G1828563 | NA | non-coding | upstream | 56846 | 10444773 ~ 10444993 (-) |
| G1828582 | NA | non-coding | upstream | 81316 | 10469243 ~ 10469450 (-) |
| G1828583 | NA | non-coding | upstream | 82920 | 10470847 ~ 10471685 (-) |
| G1827761 | NA | other | downstream | 698752 | 9688457 ~ 9688844 (-) |
| G1827690 | NA | other | downstream | 842623 | 9544383 ~ 9544973 (-) |
| G1827656 | NA | other | downstream | 921106 | 9466070 ~ 9466490 (-) |
| LOC110512783 | tcerg1l | other | downstream | 962115 | 9406037 ~ 9611812 (-) |
| G1827339 | NA | other | downstream | 1227981 | 9159197 ~ 9159615 (-) |
| G1829417 | LOC106604325 | other | upstream | 815140 | 11203067 ~ 11203996 (-) |
| G1829918 | NA | other | upstream | 1345503 | 11733430 ~ 11733926 (-) |
| LOC118943913 | drgx | other | upstream | 1412756 | 11798161 ~ 11807866 (-) |
| LOC110502234 | LOC106604225 | other | upstream | 1530152 | 11907827 ~ 11953940 (-) |
| LOC110502269 | LOC106604550 | other | upstream | 2005036 | 12392924 ~ 12411810 (-) |
