XLOC_037581


Basic Information

Item Value
gene id XLOC_037581
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 2861221 ~ 2866454 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073816
GGGGGAGCTCTGATACAGGACACATTCTGAAATGCAGATACAAAAACAAACTCGCCGAGAGAGCTGCTGGACTGTGGTGGACATTTAAACCCTCATATTAAAGTCTGAAATGTgctGAATCTGGACGTTCTGCAGGaggagagatagatagagagagagagagagcgagcgggGGAAATGGACGGGTTTTATGGAGCTGATCCGGAACAGAGAGTCTCTCGGCTGTGATGTGGAGCCACTCGTAAGCTTCATTAGTTTTTAGCTCATTAATCTGCTCTCTCATAACCTGTAACACACAATTCAGCTCAGTTCATTACACCACTCGGCTCACGCCAGAGGCCTTCATTCATATAAACATCACATTTGAGGAGGATTGTGGGAAAACAAACAAGGAAATGGCAAATCCtcttcatttcttttattttgttgacTGAATATTTATTGGACTTTTGAATAAACATAACAGAATtgcacaaa
>TCONS_00074960
CATTAGTCAAGAATACTGAGGAGGTGCAGTTCGGTGTTGCTCCTGAAGGGGGAGCTCTGATACAGGACACATTCTGAAATGCAGATACAAAAACAAACTCGCCGAGAGAGCTGCTGGACTGTGGTGGACATTTAAACCCTCATATTAAAGTCTGAAATGTGTGAGTATGTGTAGTCTAAAATTATATCATCGACCAAGAGCGTCGAGCGCCAAAAAGGGAAACGATATTTTACGCCAGACAGCTCGCTGGTCAATGACAACCCACTGTGGTGGTGGTGTGTTTACTAGGGGGAAGAACACAATGACAAAACTTgctGAATCTGGACGTTCTGCAGGaggagagatagatagagagagagagagagcgagcgggGGAAATGGACGGGTTTTATGGAGCTGATCCGGAACAGAGAGTCTCTCGGCTGTGATGTGGAGCCACTCGTAAGCTTCATTAGTTTTTAGCTCATTAATCTGCTCTCTCATAACCTGTAACACACAATTCAGCTCAGTTCATTACACCACTCGGCTCACGCCAGAGGCCTTCATTCATATAAACATCACATTTGAGGAGGATTGTGGGAAAACAAACAAGGAAATGGCAAATCCtcttcatttcttttattttgttgacTGAATATTTATTGGACTTTTGAATAAACATAACAGAATtgcacaaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073816 False 477 lncRNA 0.43 2 2861221 2866407
TCONS_00074960 True 677 lncRNA 0.44 2 2861221 2866454

Neighbor

gene id symbol gene type direction distance location
XLOC_037580 NA coding downstream 80398 2777346 ~ 2780823 (-)
XLOC_037579 sp9 coding downstream 266757 2591968 ~ 2594464 (-)
XLOC_037578 scrn3 coding downstream 288100 2560219 ~ 2573121 (-)
XLOC_037577 NA coding downstream 303914 2553874 ~ 2557307 (-)
XLOC_037576 NA coding downstream 471413 2382341 ~ 2389808 (-)
XLOC_037582 cdca7a coding upstream 13309 2879763 ~ 2892250 (-)
XLOC_037583 zak coding upstream 29555 2896009 ~ 2945008 (-)
XLOC_037584 rapgef4 coding upstream 82818 2949272 ~ 3034125 (-)
XLOC_037585 NA coding upstream 264234 3130688 ~ 3132168 (-)
XLOC_037586 pdk1 coding upstream 268608 3135062 ~ 3149896 (-)
XLOC_037575 CU639436.1 non-coding downstream 523918 2330861 ~ 2337303 (-)
XLOC_037574 BX255915.1 non-coding downstream 583585 2226463 ~ 2277636 (-)
XLOC_037587 FP236594.1 non-coding upstream 287272 3153726 ~ 3154286 (-)
XLOC_037588 NA non-coding upstream 399114 3265568 ~ 3280451 (-)
XLOC_037589 NA non-coding upstream 491943 3358397 ~ 3395521 (-)
XLOC_037598 FP102171.1 non-coding upstream 1577464 4443918 ~ 4447104 (-)

Expression


Co-expression Network