XLOC_037588



Basic Information


Item Value
gene id XLOC_037588
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 3265568 ~ 3280451 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00075284
agagagagatgtggtAAGATGTGATGTTATCAAACAGTAAAGTGGAGCTTTATGAAGTGGCCATTATGTCAGTTGACTCATAGATTAGACGGAGGGAAAATTTCCTCCAATGGGGGTGGAAAGAAGGTGTCGGGAGCTCGATGAAATGGCTGACCTTTGCGAAGTGGAGGAAGGAATGGCAGCGCAAACTGACCCTGGCAAATTCTGTGTCATTATCCCTGCCATGGCTGGACAATCTGCTCAAACGCCCATCGGTAATACCCTGACAGAGCTGGATTACTGCTTTACTGACGAAACGTTCATGACCTCTGGGCTGTCCAGCACTGCAGACTAAAGCGTGGAGACTGTGAGGAGGAtaaactgagAGCTGCATGTTGAGCTGTGGAGATCAGAGGCTCAGCTCTGGTAAAGCGTGATGGGATCTGACAGCAGCGGCGGCCCCCAGGTCTCCTGCGGCTGATTGTGGGGCCGTTCGGGCTGAATCCCGGAAGCACCTGCCTCCTCTACAGCACTCAGAGCTCAGGATCAGACTACACCTGATGTGGTtttcattaaacacacacactcacacactccagCAGGACTGCCAGTCAGAATCTTCACATCTGTGATCTCAATAAGCCGGAAGAGCTGTGACTCAGACTGACGATATGCTTTAAGCACACACGCACAGGATGCTGCACATTTAATTTCATCATTAATACTTGTGTTAAAAAAGTACACTTTAGTAAACTTTTTGAAAGAGTACAacacagttggagtcagaattattagccctcctgaattattataaaatgtagtgAGCTATATTAGCAACTCTACTTTAAATGTAGCTTAACTGTATTAAAAGCTgccctctgggaaatgtagcaagctaaatTAAAAGCTACTTGACAAAAGTAGCTTATCTAAactatttttgtcattttcatttttaaatcgaagcagcGTAAATCCTTAAGTCAATTGCATCTtattgatcaataaaactgtcaataaaacatatgaggcagaattgttcagttcagttatttactgcaaataatatgctgtactaaacagaaacacatttttaaaaatccaataaaaccaggtgctacacatttaaaaaactatagtcattcattcatccatgttcttttttagcttagtccctttattaatctacggtcaccacagcggaatgaaccgccaacttatctagcatatgttttacgcctcggatgcccttccagctgcaacccatctctgggaaacatccatacacactcattcacactactaCTAATTTAATATCATTAGTAACTATAATGAATTTATAGTAATTATTATAGTATAGTGTTGCCTTTACTGTagtaaactataaatatatacagttgaagtcagaattatgagcccccctgaattattagc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko03070 Bacterial secretion system
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00075284 True 1413 lncRNA 0.41 2 3265568 3280451

Neighbor


gene id symbol gene type direction distance location
XLOC_037587 FP236594.1 coding downstream 111282 3153726 ~ 3154286 (-)
XLOC_037586 pdk1 coding downstream 115672 3135062 ~ 3149896 (-)
XLOC_037585 NA coding downstream 133400 3130688 ~ 3132168 (-)
XLOC_037584 rapgef4 coding downstream 231443 2949272 ~ 3034125 (-)
XLOC_037583 zak coding downstream 320560 2896009 ~ 2945008 (-)
XLOC_037589 NA coding upstream 77946 3358397 ~ 3395521 (-)
XLOC_037590 dlx2a coding upstream 116956 3397407 ~ 3400729 (-)
XLOC_037591 cybrd1 coding upstream 210373 3490824 ~ 3496579 (-)
XLOC_037592 dcaf17 coding upstream 217926 3498377 ~ 3519717 (-)
XLOC_037593 gad1a coding upstream 341517 3621968 ~ 3653271 (-)
XLOC_037581 NA non-coding downstream 399114 2861221 ~ 2866454 (-)
XLOC_037580 NA non-coding downstream 484745 2777346 ~ 2780823 (-)
XLOC_037577 NA non-coding downstream 708261 2553874 ~ 2557307 (-)
XLOC_037598 FP102171.1 non-coding upstream 1163467 4443918 ~ 4447104 (-)
XLOC_037602 NA non-coding upstream 1585649 4866100 ~ 4867439 (-)
XLOC_037613 FQ377643.1 non-coding upstream 3128706 6409157 ~ 6409271 (-)
XLOC_037614 NA non-coding upstream 3251098 6531549 ~ 6548796 (-)

Expression



Co-expression Network