G1830747


Basic Information

Item Value
gene id G1830747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 12357840 ~ 12358788 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2096810
ctgtattttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatattttaaacttttttaacaaatcaaaaactgaaaaattgagcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgtggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagctcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagcttaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccaattcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtgaaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatcccctctgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagagacagggaagatggttaaaattgatgggaagatgggtgg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2096810 True 949 lncRNA 0.42 1 12357840 12358788

Neighbor

gene id symbol gene type direction distance location
LOC110502227 LOC106604178 coding downstream 14718 12285630 ~ 12343122 (-)
LOC110503075 LOC105010677 coding downstream 103593 12219657 ~ 12254247 (-)
LOC110502229 NA coding downstream 152178 12181538 ~ 12205662 (-)
LOC110502230 LOC106604182 coding downstream 181892 12115099 ~ 12175948 (-)
znf511 NA coding downstream 259096 12094868 ~ 12098744 (-)
LOC110502269 LOC106604550 coding upstream 34136 12392924 ~ 12411810 (-)
LOC110502270 LOC106604566 coding upstream 55121 12413909 ~ 12443202 (-)
LOC110502271 LOC106604578 coding upstream 152587 12511375 ~ 12529518 (-)
LOC110502273 LOC106604587 coding upstream 201617 12560405 ~ 12576330 (-)
LOC110502275 LOC106604599 coding upstream 226522 12580816 ~ 12651383 (-)
G1830746 NA non-coding downstream 1253 12356255 ~ 12356587 (-)
G1830709 NA non-coding downstream 48732 12308452 ~ 12309108 (-)
G1830702 NA non-coding downstream 54590 12302869 ~ 12303250 (-)
G1830676 ap3m1 non-coding downstream 87044 12270191 ~ 12270796 (-)
G1830653 NA non-coding downstream 116037 12236212 ~ 12241803 (-)
G1830753 NA non-coding upstream 4503 12363291 ~ 12363952 (-)
G1830754 NA non-coding upstream 7237 12366025 ~ 12366227 (-)
G1830844 NA non-coding upstream 48830 12407618 ~ 12407925 (-)
G1830868 NA non-coding upstream 93089 12451877 ~ 12461155 (-)
G1830880 NA non-coding upstream 106956 12465744 ~ 12465962 (-)
LOC110502234 LOC106604225 other downstream 404207 11907827 ~ 11953940 (-)
LOC118943913 drgx other downstream 554709 11798161 ~ 11807866 (-)
G1829918 NA other downstream 623914 11733430 ~ 11733926 (-)
G1829417 LOC106604325 other downstream 1153844 11203067 ~ 11203996 (-)
G1827761 NA other downstream 2668996 9688457 ~ 9688844 (-)
G1833570 NA other upstream 2161561 14520349 ~ 14520929 (-)
G1834810 NA other upstream 2807421 15166209 ~ 15166919 (-)
G1834927 NA other upstream 3139966 15498754 ~ 15500261 (-)

Expression


Co-expression Network