G1830868


Basic Information

Item Value
gene id G1830868
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 12451877 ~ 12461155 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2096978
gtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagaaactgaaattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggcctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2096978 True 515 lncRNA 0.40 2 12451877 12461155

Neighbor

gene id symbol gene type direction distance location
LOC110502270 LOC106604566 coding downstream 8675 12413909 ~ 12443202 (-)
LOC110502269 LOC106604550 coding downstream 40067 12392924 ~ 12411810 (-)
LOC110502227 LOC106604178 coding downstream 108755 12285630 ~ 12343122 (-)
LOC110503075 LOC105010677 coding downstream 197630 12219657 ~ 12254247 (-)
LOC110502229 NA coding downstream 246215 12181538 ~ 12205662 (-)
LOC110502271 LOC106604578 coding upstream 50220 12511375 ~ 12529518 (-)
LOC110502273 LOC106604587 coding upstream 99250 12560405 ~ 12576330 (-)
LOC110502275 LOC106604599 coding upstream 124155 12580816 ~ 12651383 (-)
pik3ap1 LOC106604619 coding upstream 192721 12653876 ~ 12687538 (-)
LOC110502279 emx2 coding upstream 583201 13044356 ~ 13049486 (-)
G1830844 NA non-coding downstream 43952 12407618 ~ 12407925 (-)
G1830754 NA non-coding downstream 85650 12366025 ~ 12366227 (-)
G1830753 NA non-coding downstream 87925 12363291 ~ 12363952 (-)
G1830747 NA non-coding downstream 93089 12357840 ~ 12358788 (-)
G1830746 NA non-coding downstream 95290 12356255 ~ 12356587 (-)
G1830880 NA non-coding upstream 4589 12465744 ~ 12465962 (-)
G1830891 NA non-coding upstream 11934 12473089 ~ 12473346 (-)
G1830906 NA non-coding upstream 19894 12481049 ~ 12481349 (-)
G1831083 NA non-coding upstream 77422 12538577 ~ 12538811 (-)
G1831088 NA non-coding upstream 84556 12545711 ~ 12546205 (-)
LOC110502234 LOC106604225 other downstream 498244 11907827 ~ 11953940 (-)
LOC118943913 drgx other downstream 648746 11798161 ~ 11807866 (-)
G1829918 NA other downstream 717951 11733430 ~ 11733926 (-)
G1829417 LOC106604325 other downstream 1247881 11203067 ~ 11203996 (-)
G1833570 NA other upstream 2059194 14520349 ~ 14520929 (-)
G1834810 NA other upstream 2705054 15166209 ~ 15166919 (-)
G1834927 NA other upstream 3037599 15498754 ~ 15500261 (-)
tmem254 cj057 other upstream 3205048 15666203 ~ 15671223 (-)

Expression


Co-expression Network