Gene
RNA
| Item | Value |
|---|---|
| gene id | G1831093 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 12552381 ~ 12552599 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106580378 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2097213 | True | 219 | lncRNA | 0.46 | 1 | 12552381 | 12552599 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502271 | LOC106604578 | coding | downstream | 22863 | 12511375 ~ 12529518 (-) |
| LOC110502270 | LOC106604566 | coding | downstream | 109179 | 12413909 ~ 12443202 (-) |
| LOC110502269 | LOC106604550 | coding | downstream | 140571 | 12392924 ~ 12411810 (-) |
| LOC110502227 | LOC106604178 | coding | downstream | 209259 | 12285630 ~ 12343122 (-) |
| LOC110503075 | LOC105010677 | coding | downstream | 298134 | 12219657 ~ 12254247 (-) |
| LOC110502273 | LOC106604587 | coding | upstream | 7806 | 12560405 ~ 12576330 (-) |
| LOC110502275 | LOC106604599 | coding | upstream | 32711 | 12580816 ~ 12651383 (-) |
| pik3ap1 | LOC106604619 | coding | upstream | 101277 | 12653876 ~ 12687538 (-) |
| LOC110502279 | emx2 | coding | upstream | 491757 | 13044356 ~ 13049486 (-) |
| LOC110502281 | eif3a | coding | upstream | 515236 | 13067835 ~ 13084070 (-) |
| G1831092 | NA | non-coding | downstream | 1225 | 12550917 ~ 12551156 (-) |
| G1831088 | NA | non-coding | downstream | 6176 | 12545711 ~ 12546205 (-) |
| G1831083 | NA | non-coding | downstream | 13570 | 12538577 ~ 12538811 (-) |
| G1830906 | NA | non-coding | downstream | 71032 | 12481049 ~ 12481349 (-) |
| G1830891 | NA | non-coding | downstream | 79035 | 12473089 ~ 12473346 (-) |
| G1831095 | NA | non-coding | upstream | 782 | 12553381 ~ 12553730 (-) |
| G1831096 | NA | non-coding | upstream | 1247 | 12553846 ~ 12554124 (-) |
| G1831142 | NA | non-coding | upstream | 141697 | 12694296 ~ 12694586 (-) |
| G1831155 | NA | non-coding | upstream | 148972 | 12701571 ~ 12706584 (-) |
| LOC110502234 | LOC106604225 | other | downstream | 598748 | 11907827 ~ 11953940 (-) |
| LOC118943913 | drgx | other | downstream | 749250 | 11798161 ~ 11807866 (-) |
| G1829918 | NA | other | downstream | 818455 | 11733430 ~ 11733926 (-) |
| G1829417 | LOC106604325 | other | downstream | 1348385 | 11203067 ~ 11203996 (-) |
| G1833570 | NA | other | upstream | 1967750 | 14520349 ~ 14520929 (-) |
| G1834810 | NA | other | upstream | 2613610 | 15166209 ~ 15166919 (-) |
| G1834927 | NA | other | upstream | 2946155 | 15498754 ~ 15500261 (-) |
| tmem254 | cj057 | other | upstream | 3113604 | 15666203 ~ 15671223 (-) |
