Gene
RNA
| Item | Value |
|---|---|
| gene id | G1831142 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 12694296 ~ 12694586 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2097266 | True | 291 | lncRNA | 0.46 | 1 | 12694296 | 12694586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pik3ap1 | LOC106604619 | coding | downstream | 6758 | 12653876 ~ 12687538 (-) |
| LOC110502275 | LOC106604599 | coding | downstream | 42913 | 12580816 ~ 12651383 (-) |
| LOC110502273 | LOC106604587 | coding | downstream | 117966 | 12560405 ~ 12576330 (-) |
| LOC110502271 | LOC106604578 | coding | downstream | 164778 | 12511375 ~ 12529518 (-) |
| LOC110502270 | LOC106604566 | coding | downstream | 251094 | 12413909 ~ 12443202 (-) |
| LOC110502279 | emx2 | coding | upstream | 349770 | 13044356 ~ 13049486 (-) |
| LOC110502281 | eif3a | coding | upstream | 373249 | 13067835 ~ 13084070 (-) |
| sfxn4 | sfxn4 | coding | upstream | 404581 | 13099167 ~ 13116030 (-) |
| LOC110502284 | tm9s3 | coding | upstream | 428836 | 13123422 ~ 13146350 (-) |
| LOC110502288 | abhd12 | coding | upstream | 454241 | 13148827 ~ 13167879 (-) |
| G1831096 | NA | non-coding | downstream | 140172 | 12553846 ~ 12554124 (-) |
| G1831095 | NA | non-coding | downstream | 140566 | 12553381 ~ 12553730 (-) |
| G1831093 | NA | non-coding | downstream | 141697 | 12552381 ~ 12552599 (-) |
| G1831092 | NA | non-coding | downstream | 143140 | 12550917 ~ 12551156 (-) |
| G1831155 | NA | non-coding | upstream | 6985 | 12701571 ~ 12706584 (-) |
| G1831284 | NA | non-coding | upstream | 27440 | 12722026 ~ 12722262 (-) |
| G1831302 | NA | non-coding | upstream | 60280 | 12754866 ~ 12755151 (-) |
| G1831325 | NA | non-coding | upstream | 90533 | 12785119 ~ 12785339 (-) |
| G1831329 | NA | non-coding | upstream | 103684 | 12798270 ~ 12798631 (-) |
| LOC110502269 | LOC106604550 | other | downstream | 298649 | 12392924 ~ 12411810 (-) |
| LOC110502234 | LOC106604225 | other | downstream | 740663 | 11907827 ~ 11953940 (-) |
| LOC118943913 | drgx | other | downstream | 891165 | 11798161 ~ 11807866 (-) |
| G1829918 | NA | other | downstream | 960370 | 11733430 ~ 11733926 (-) |
| G1833570 | NA | other | upstream | 1825763 | 14520349 ~ 14520929 (-) |
| G1834810 | NA | other | upstream | 2471623 | 15166209 ~ 15166919 (-) |
| G1834927 | NA | other | upstream | 2804168 | 15498754 ~ 15500261 (-) |
| tmem254 | cj057 | other | upstream | 2971617 | 15666203 ~ 15671223 (-) |
| G1835092 | NA | other | upstream | 3051052 | 15745638 ~ 15747735 (-) |
