Gene
RNA
| Item | Value |
|---|---|
| gene id | G1831339 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 12819917 ~ 12820218 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pogo transposable element with KRAB domain |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2097471 | True | 302 | lncRNA | 0.44 | 1 | 12819917 | 12820218 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pik3ap1 | LOC106604619 | coding | downstream | 132379 | 12653876 ~ 12687538 (-) |
| LOC110502275 | LOC106604599 | coding | downstream | 168534 | 12580816 ~ 12651383 (-) |
| LOC110502273 | LOC106604587 | coding | downstream | 243587 | 12560405 ~ 12576330 (-) |
| LOC110502271 | LOC106604578 | coding | downstream | 290399 | 12511375 ~ 12529518 (-) |
| LOC110502270 | LOC106604566 | coding | downstream | 376715 | 12413909 ~ 12443202 (-) |
| LOC110502279 | emx2 | coding | upstream | 224138 | 13044356 ~ 13049486 (-) |
| LOC110502281 | eif3a | coding | upstream | 247617 | 13067835 ~ 13084070 (-) |
| sfxn4 | sfxn4 | coding | upstream | 278949 | 13099167 ~ 13116030 (-) |
| LOC110502284 | tm9s3 | coding | upstream | 303204 | 13123422 ~ 13146350 (-) |
| LOC110502288 | abhd12 | coding | upstream | 328609 | 13148827 ~ 13167879 (-) |
| G1831329 | NA | non-coding | downstream | 21286 | 12798270 ~ 12798631 (-) |
| G1831325 | NA | non-coding | downstream | 34578 | 12785119 ~ 12785339 (-) |
| G1831302 | NA | non-coding | downstream | 64766 | 12754866 ~ 12755151 (-) |
| G1831284 | NA | non-coding | downstream | 97655 | 12722026 ~ 12722262 (-) |
| G1831155 | NA | non-coding | downstream | 113333 | 12701571 ~ 12706584 (-) |
| G1831340 | NA | non-coding | upstream | 250 | 12820468 ~ 12820765 (-) |
| G1831388 | NA | non-coding | upstream | 87564 | 12907782 ~ 12907988 (-) |
| G1831444 | NA | non-coding | upstream | 137762 | 12957980 ~ 12958191 (-) |
| G1831475 | LOC101154678 | non-coding | upstream | 157784 | 12978002 ~ 12978226 (-) |
| G1832329 | NA | non-coding | upstream | 245692 | 13065910 ~ 13066142 (-) |
| LOC110502269 | LOC106604550 | other | downstream | 424270 | 12392924 ~ 12411810 (-) |
| LOC110502234 | LOC106604225 | other | downstream | 866284 | 11907827 ~ 11953940 (-) |
| LOC118943913 | drgx | other | downstream | 1016786 | 11798161 ~ 11807866 (-) |
| G1829918 | NA | other | downstream | 1085991 | 11733430 ~ 11733926 (-) |
| G1833570 | NA | other | upstream | 1700131 | 14520349 ~ 14520929 (-) |
| G1834810 | NA | other | upstream | 2345991 | 15166209 ~ 15166919 (-) |
| G1834927 | NA | other | upstream | 2678536 | 15498754 ~ 15500261 (-) |
| tmem254 | cj057 | other | upstream | 2845985 | 15666203 ~ 15671223 (-) |
| G1835092 | NA | other | upstream | 2925420 | 15745638 ~ 15747735 (-) |
