Gene
RNA
| Item | Value |
|---|---|
| gene id | G1831475 |
| gene name | LOC101154678 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 12978002 ~ 12978226 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2097608 | True | 225 | lncRNA | 0.52 | 1 | 12978002 | 12978226 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pik3ap1 | LOC106604619 | coding | downstream | 290464 | 12653876 ~ 12687538 (-) |
| LOC110502275 | LOC106604599 | coding | downstream | 326619 | 12580816 ~ 12651383 (-) |
| LOC110502273 | LOC106604587 | coding | downstream | 401672 | 12560405 ~ 12576330 (-) |
| LOC110502271 | LOC106604578 | coding | downstream | 448484 | 12511375 ~ 12529518 (-) |
| LOC110502270 | LOC106604566 | coding | downstream | 534800 | 12413909 ~ 12443202 (-) |
| LOC110502279 | emx2 | coding | upstream | 66130 | 13044356 ~ 13049486 (-) |
| LOC110502281 | eif3a | coding | upstream | 89609 | 13067835 ~ 13084070 (-) |
| sfxn4 | sfxn4 | coding | upstream | 120941 | 13099167 ~ 13116030 (-) |
| LOC110502284 | tm9s3 | coding | upstream | 145196 | 13123422 ~ 13146350 (-) |
| LOC110502288 | abhd12 | coding | upstream | 170601 | 13148827 ~ 13167879 (-) |
| G1831444 | NA | non-coding | downstream | 19811 | 12957980 ~ 12958191 (-) |
| G1831388 | NA | non-coding | downstream | 70014 | 12907782 ~ 12907988 (-) |
| G1831340 | NA | non-coding | downstream | 157237 | 12820468 ~ 12820765 (-) |
| G1831339 | NA | non-coding | downstream | 157784 | 12819917 ~ 12820218 (-) |
| G1831329 | NA | non-coding | downstream | 179371 | 12798270 ~ 12798631 (-) |
| G1832329 | NA | non-coding | upstream | 87684 | 13065910 ~ 13066142 (-) |
| G1832348 | LOC106604759 | non-coding | upstream | 195965 | 13174191 ~ 13178346 (-) |
| G1832362 | NA | non-coding | upstream | 204990 | 13183216 ~ 13183839 (-) |
| G1832384 | NA | non-coding | upstream | 251795 | 13230021 ~ 13239763 (-) |
| G1832439 | ikaros | non-coding | upstream | 361336 | 13339562 ~ 13342191 (-) |
| LOC110502269 | LOC106604550 | other | downstream | 582355 | 12392924 ~ 12411810 (-) |
| LOC110502234 | LOC106604225 | other | downstream | 1024369 | 11907827 ~ 11953940 (-) |
| LOC118943913 | drgx | other | downstream | 1174871 | 11798161 ~ 11807866 (-) |
| G1829918 | NA | other | downstream | 1244076 | 11733430 ~ 11733926 (-) |
| G1833570 | NA | other | upstream | 1542123 | 14520349 ~ 14520929 (-) |
| G1834810 | NA | other | upstream | 2187983 | 15166209 ~ 15166919 (-) |
| G1834927 | NA | other | upstream | 2520528 | 15498754 ~ 15500261 (-) |
| tmem254 | cj057 | other | upstream | 2687977 | 15666203 ~ 15671223 (-) |
| G1835092 | NA | other | upstream | 2767412 | 15745638 ~ 15747735 (-) |
