Gene
RNA
| Item | Value |
|---|---|
| gene id | G1831724 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 13344894 ~ 13377205 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110512213 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2097898 | True | 340 | lncRNA | 0.36 | 2 | 13344894 | 13377205 |
13,340,000
13,344,000
13,348,000
13,352,000
13,356,000
13,360,000
13,364,000
13,368,000
13,372,000
13,376,000
13,380,000
13,384,000
13,388,000
13,392,000
13,396,000
13,400,000
13,404,000
13,408,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ikzf1 | ikzf1 | coding | upstream | 2698 | 13319400 ~ 13342196 (+) |
| spata48 | cssa01h7orf72 | coding | upstream | 42242 | 13278628 ~ 13302652 (+) |
| LOC110502291 | vwc2 | coding | upstream | 79078 | 13217619 ~ 13265816 (+) |
| LOC110502290 | LOC106604744 | coding | upstream | 131871 | 13197751 ~ 13213023 (+) |
| LOC110502289 | LOC106604759 | coding | upstream | 166523 | 13174349 ~ 13178371 (+) |
| LOC110502293 | NA | coding | downstream | 1156 | 13378361 ~ 13381061 (+) |
| ttl | LOC106604770 | coding | downstream | 5006 | 13382211 ~ 13395987 (+) |
| LOC110502297 | LOC106604807 | coding | downstream | 77438 | 13454643 ~ 13481494 (+) |
| cdc42ep3 | LOC106604835 | coding | downstream | 198132 | 13575337 ~ 13586172 (+) |
| LOC110502300 | LOC106605317 | coding | downstream | 286287 | 13663492 ~ 13671901 (+) |
| G1831695 | NA | non-coding | upstream | 59671 | 13284700 ~ 13285223 (+) |
| G1831636 | NA | non-coding | upstream | 165684 | 13175962 ~ 13179210 (+) |
| G1831619 | NA | non-coding | upstream | 195535 | 13148826 ~ 13149359 (+) |
| G1831597 | NA | non-coding | upstream | 197327 | 13094907 ~ 13147567 (+) |
| G1831748 | NA | non-coding | downstream | 353 | 13377558 ~ 13377833 (+) |
| G1831753 | NA | non-coding | downstream | 9011 | 13386216 ~ 13386476 (+) |
| G1831755 | NA | non-coding | downstream | 19167 | 13396372 ~ 13396600 (+) |
| G1831222 | NA | other | upstream | 537737 | 12806794 ~ 12807157 (+) |
| LOC110502277 | fam204a | other | upstream | 609578 | 12729848 ~ 12747359 (+) |
| G1831035 | NA | other | upstream | 707730 | 12636472 ~ 12637164 (+) |
| G1831003 | NA | other | upstream | 754065 | 12589467 ~ 12590829 (+) |
| G1830449 | NA | other | upstream | 1036928 | 12307566 ~ 12307966 (+) |
| G1831809 | NA | other | downstream | 116357 | 13493562 ~ 13493965 (+) |
| LOC110503083 | LOC106605092 | other | downstream | 2340606 | 15717449 ~ 15743397 (+) |
| G1834634 | NA | other | downstream | 2384108 | 15761313 ~ 15761582 (+) |
| G1835378 | NA | other | downstream | 2817963 | 16195168 ~ 16202860 (+) |
| LOC110502340 | kcng3 | other | downstream | 3143794 | 16519036 ~ 16528382 (+) |
