G1832482


Basic Information

Item Value
gene id G1832482
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 13391640 ~ 13395954 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2098719
tttttttatccaATCAAGTTTTCATGCAAGAGTTTAAGAAACAAAGGCTGAAGAAAAAGACATCATAGACATTCCTctgactacatacagtacagtataacctTGTTGACTGGAGGAGAGATTAACATTTCAAATGTGTCAATGTTGCTGTTATGTCTTATACGGATTTCTTTCTTCTTGGCTGCCTTGGTTTAGTGAAAATGTTTGATAATGACAGATTTAAGTCACTTCTTCGTCTCCCATGGCGGTACACTCAAAGGAAGTTACACATTGCTCTTTAAAGGCCTTGAAATACCTAAAACGCACATTCATAGCTAGATAAGTAATACTATGGGGGAAAATAATGACATTCCTTTTAGACATAAAAGCAATTTTTCAACTTTGGTAAGAAATAGGAATTCATAAAATACGATGATAATGCAAGTAATTAAAAATGGGAAAAGTTCAGTTCAAATAAACTGAGGAGAACCAGACGTTACAAGAGATTGAACAATTAACAGTCACACAGACCAGATAGCAATAGCCAAATGTATCTTTTTACAATCAAACAAATGAAATATGCAGGAGGTTTATTGCATCTTCCAAACATCAAGAGGCAATTCCCACTGACACCCCTTCCCTTGGCTTGAAAGACATTTCCCTAATTTTGATAATACTGATAATTGTCTTTGGATATTTTCCAATATGTTGAAtaaagttttattttttttatctagaAACAAACCTTTATTTTTTGCCCCTATGATATACAATCTAACTGAACATTCAACGGcaactactatataatataattcATAGCCATTGTACGTTTTGACCATGTGCATATcaaatagatttgattttagcAGTCATTCACTTGTCCGTACATCATTCCCCATAGCAATCTTGTAAACATAAGATACGGATTAAAATATAAATGTGCCAATGTTGTCCCTTAAGCGGTGTTTGACTCAAAACATGTTGAAGCATGACCTCAACTAAAATATTTGAAAATGTGTGATAATGAAGAGAAGAGGTAGTGGTTAAAGGGGCAGTCTGCAGTCGTACCCATtggttcttgaagaatataacttgcaCATGCCTCATGAGTTAAGTTCAACTTTCGtatcccatcagaaccttcaaattagttgacTTAGTTATTTCAGCCTCAcccttgctgacaggtgtataaaatcgagcacacagccatgcaatctccatacacaaaccttggcagtagaatggccttactgaagagctcagtgagtttcaacatggcacagtcataggatgccacatttccaataagtcagttcgtAAAGTTtttgccctgttagagctgccccggtcaactgtaagttctgttattgtgaagtggaaatgtttaagagcaacaatggctcagccttgaagtggtaggccacacaagcacacagaactGGACCGCCAAGTGTTGAAGcttgtaaaaattgtctgtccttggttgcaacacatactacagagttccaaactgtatctggaagcaacgtcagcacaagaactgttcgtcgggagcttcatgaaatgggtttccatggccgagcagcagcacacaagcctaagatctccatgcgcaatgccaagcgctgACTGgcgtggtgtaaagcttgccgccattggactctggagcgacgaatcacgcttcaccaactggcagtccaacagacaaatctgggtttggAGGAATAATCGTctgaggaataatgttctggggttgttttccatggttcgggctaggccccttagttccagtgaagggaaatcttaatgctacagcataaaatacattgtagacaattctgtgcttccaactttggggaaggccctttcctgttttagcatgacaatgcccctgtgcacaaagcaaggttcatacagaaatgttttgttgacatctgtgtggaagaacttgactggcctgcacagagccctgacatcaaccccatcgaacacctttaggatgaattggtacgccaactgcgagccgggcctaatcggccaacagcagtgtccaacctcactaatactcttgtggctgaatggaagcaagtcccagcagcaatgttcaaacatctagtggaaagccttcccagaagagtggaggctgttatagcagcaaaggggggggaccaagtccatgttaatgccaatgatttttttacgagatgttcaacgagaaggtgtccacatactttttcatGTAGTGTATAAGCTTggtttactccaatgtttgtaaacaaagtacatgtaaacaaacaatagcctaaaaacatggttaaaactctaattttgatatcatgggatggtcagtccttgcatccatagctcggtctatgaatttgagtggttacattttttCCAGCCGCATCCCCCTAGCCTTTTACCGAAACAGATGCACTTTGTTATCATTTCAACTACGGATTGCCCCTTTTAAAAGGGACTAACTAAtacttaaaatacattttaacagAGGACAAAGTAACTTAATCTAAGAGTTAACTGTGGGCAATAATGCTAAAGCCTCTGTAAACTGAACGTGGTCAGGTTGTCTACACTGAATAGTACAGTTTAACAGACAGACAAGGGCAGGAAAAACTACTTGTTAGCATGCATGCATTACAACTCCACGTAATATTATGGAAGCTATGCAACACCATAACCAACAGCGCTAGTAGTCTAAAAATCCTTTTATCCTTCCTTGCGTTGACAAAGTAGTTTGTGGGGTTGAAGCTACTATGTTTACTAGAGGTTTTCAAGGAAAAACTAACAAGAAACTCACTTTCTATGAAATAGaccatttttaaaaaggcagctCTTGGCTACTTGCATTATGACACACAACAGACACAGTAACATGCTTCCACACCGGCATGCAATCTCTATTAAAATCACAAACAAAAACAGATCTACAGCTGTAGTGCATAACCGTGTAAAGGTTTGACTGTTAGAACCTTTAGAAGGTTCAAATGGGTTGAAATGTTCGGAAGTTGCAAAGCTAGTCTCAAATTAAACAGGGGAGGTTTATCTCTAGTCCTTCCACAAATGCTCTTTGTTGACAGAGGAAAAAGGAGTAGTCTGTCTAGGAATCTTTTGTACACTGAATGAACAACACTGACTAAATGAACTTGAATAAAAGTCTGTCAAAATGGAAGAGCTAACACTACACAGCGAGCATGGAATAACAGCTATCAAATAGCTATAATACAATTACAGTAGCAATAAAAATGTAGCCTATTTTCTGCTTTAATCCTCTTAAAATAcagtacaacaaaaaaaaactctgGGGCTTTTTCAATAATCATGATATGAAGAACGATTTATAGGCAATGTCAGGTATTCATATCAAGATGCAGGAAAGTTTTTTCCCCTCCCCTGATAATGCTAACTTTTGTGGATAAAATCCAAAGATCTCCAAacccagaaaaaaaaaaaagactagaccacacagacatacacacttgCCTGACCGACAATACACAGGCTCACATAACACACGCAGTAGCAGAGGCGCTATGCTAAAATCGACAGGTTGCATCTTTAAGGGGGTATGGGTGGAGATGTAAGGCACTAAAGTCTGTATAATAAGTGAAGCGTCCCCTCCATCTTCAGAGGCCGTCCATACACAGTCTAGGGTCGCCTCAGTGGCAGCACTGGTTCACAAGGGAAGCTTCTTGTTCTGGGACCCCCAAATCTGTCAGTCTGTCGCCAATTAATCTTAATCCTCATCACCATCCGAACATTCACCAAGTCTACACACATTCATTTTCTGAATGCCTGTCCAGGCTTTCCTCTGAAATGTGCTTCCACTGTGGGGGTATGGGGAGGAGAATGTGGTAGCACATACGAGAAAGTCACACAATCTTCAGTCAATCACAAGGGTATTCCCATTCGAGACAACTTGCCATGCAAGAACCAATGAGATGGCAAAGCTTCCTGGCCTGTGGGACATCTCGGGAAAAGCATAGGAGTGAGGAGCAGAGGGCAGAGGTTGGAACTTCTGAAGCAGAGGAGGGACTTACAACCGGGTGAATGGGCCCACGTGGAGGGGTCCTCTCAGTTTCGGAGAGGAACAGGATGAGTTGAGAGTGgaaaaggagggggaggaggagtggggagcgggggaggaggaagatgatCGTGGTTCGGTATCATTGTTCAGTGGGAAGACACTGGAGATGGCTATGTCCACGATACCTTGGCATAGCTCCGGGTAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2098719 True 4235 lncRNA 0.41 3 13391640 13395954

Neighbor

gene id symbol gene type direction distance location
fignl1 fignl1 coding downstream 30538 13351346 ~ 13361102 (-)
mocos LOC106604730 coding downstream 194447 13169146 ~ 13197193 (-)
LOC110502288 abhd12 coding downstream 223761 13148827 ~ 13167879 (-)
LOC110502284 tm9s3 coding downstream 245290 13123422 ~ 13146350 (-)
sfxn4 sfxn4 coding downstream 275610 13099167 ~ 13116030 (-)
LOC110502296 nanp coding upstream 7593 13403547 ~ 13405114 (-)
LOC110502298 LOC106604820 coding upstream 92140 13488094 ~ 13549306 (-)
LOC110502303 LOC106604861 coding upstream 278509 13674463 ~ 13710049 (-)
LOC118943841 NA coding upstream 306589 13702543 ~ 13703759 (-)
LOC110502305 marh5 coding upstream 363699 13759653 ~ 13824191 (-)
G1832480 NA non-coding downstream 2342 13389011 ~ 13389298 (-)
G1832473 NA non-coding downstream 9720 13381718 ~ 13381920 (-)
G1832472 NA non-coding downstream 10007 13381388 ~ 13381633 (-)
G1832439 ikaros non-coding downstream 49449 13339562 ~ 13342191 (-)
G1832384 NA non-coding downstream 151877 13230021 ~ 13239763 (-)
G1832483 NA non-coding upstream 848 13396802 ~ 13397308 (-)
G1832590 NA non-coding upstream 164136 13560090 ~ 13560389 (-)
G1832558 NA non-coding upstream 276562 13672516 ~ 13685923 (-)
G1832769 NA non-coding upstream 479724 13875678 ~ 13877676 (-)
G1832798 NA non-coding upstream 558444 13954398 ~ 13954643 (-)
LOC110502275 LOC106604599 other downstream 801940 12580816 ~ 12651383 (-)
LOC110502269 LOC106604550 other downstream 995993 12392924 ~ 12411810 (-)
LOC110502234 LOC106604225 other downstream 1438007 11907827 ~ 11953940 (-)
LOC118943913 drgx other downstream 1588509 11798161 ~ 11807866 (-)
G1829918 NA other downstream 1657714 11733430 ~ 11733926 (-)
G1833570 NA other upstream 1124395 14520349 ~ 14520929 (-)
G1834810 NA other upstream 1770255 15166209 ~ 15166919 (-)
G1834927 NA other upstream 2102800 15498754 ~ 15500261 (-)
tmem254 cj057 other upstream 2270249 15666203 ~ 15671223 (-)
G1835092 NA other upstream 2349684 15745638 ~ 15747735 (-)

Expression


Co-expression Network