XLOC_037602



Basic Information


Item Value
gene id XLOC_037602
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 4866100 ~ 4867439 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00075289
CACCCCCAAAACAGGATCCTCCTTGTAAAACCAAAGACATTTCAGCATTTCAACTCAGTGTCCAAAAATCTAACCACGCAAAATTTTAAAATGGTTCAAATTAAGGTAGCCTGGTTGTCCCTTTTCTtctatttcttcttcttttatgtAAAAGCAATCTACAAACAGACAGGGGAAACTGGTAAGCTCCAGAAAACAAGAGCTGAAGCCCGTTCTTTCTCTTTCCTTCATTAATCAGACACTCGTGGGACAGatacaaacattcatttattGGAAAGATATTAACAAATCATTACTGTGAATCTGTTTTGGAATAATTTAACTGTCAATGCACAACAGCAGGCTCTTACGTGCTGACATATAGAGATGGCCGCTGTcaaataataacaaaatcaaTAAATTTGTTGCCCATAATGCCAGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00075289 True 421 lncRNA 0.37 2 4866100 4867439

Neighbor


gene id symbol gene type direction distance location
XLOC_037601 fmnl2a coding downstream 9333 4730398 ~ 4856767 (-)
XLOC_037600 galnt13 coding downstream 259637 4538527 ~ 4606463 (-)
XLOC_037599 kcnj3a coding downstream 354487 4478199 ~ 4511613 (-)
XLOC_037598 FP102171.1 coding downstream 418996 4443918 ~ 4447104 (-)
XLOC_037597 mylka coding downstream 790480 4024250 ~ 4075620 (-)
XLOC_037603 nr4a2a coding upstream 173546 5040985 ~ 5046315 (-)
XLOC_037604 cytip coding upstream 385698 5253137 ~ 5263947 (-)
XLOC_037605 ACVR1C coding upstream 404085 5271524 ~ 5318873 (-)
XLOC_037606 tnfsf13b coding upstream 457576 5325015 ~ 5337923 (-)
XLOC_037607 abhd13 coding upstream 477797 5345236 ~ 5351017 (-)
XLOC_037589 NA non-coding downstream 1470579 3358397 ~ 3395521 (-)
XLOC_037588 NA non-coding downstream 1585649 3265568 ~ 3280451 (-)
XLOC_037587 FP236594.1 non-coding downstream 1711814 3153726 ~ 3154286 (-)
XLOC_037585 NA non-coding downstream 1733932 3130688 ~ 3132168 (-)
XLOC_037613 FQ377643.1 non-coding upstream 1541718 6409157 ~ 6409271 (-)
XLOC_037614 NA non-coding upstream 1664110 6531549 ~ 6548796 (-)
XLOC_037618 BX842683.1 non-coding upstream 1850238 6717677 ~ 6717801 (-)
XLOC_037626 BX942813.1 non-coding upstream 2490380 7357819 ~ 7359484 (-)
XLOC_037631 NA non-coding upstream 2631821 7499260 ~ 7505531 (-)

Expression



Co-expression Network