G1836142


Basic Information

Item Value
gene id G1836142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 16650832 ~ 16651734 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2102672
GAAGGTATATGTTGGGGTCAATGGAGGGTGGATAATAGCTATGTGTATGGAAAGTAACTGAGTGAGACAATGGGGGGAGGCAGGGAGTATTTGTTACTGTTAAATCTCATGGATCCTATGGAGGGAGGCAAAGGGCAACAGTCTGGTTTCAGTCACTGATAAAGTAGGACAGCCGTGGATTAGGGAGGAGCGAGGAATTCAGcctgaggtcaggtcagatgaagtgagaaggAACAGTCCTATCCCACACACATTTCCACACCCACGAAGGTTCTAGCCTGAGGCAGGGCCATGACTACACCAGTAAGAGGAAACCAATTAAGTTCCTGACTTAGCAACAGAGACGTATTGGCTGTCTAGATGGGCAAGGACTTGACTCCGCCTAGTAGGAGGGTATAAATATATGTGCTTGTGTAaacatgtctttgtctttgtacctgtttgacccagtgggtgaataaacatACTTTTTCCTAGTCATCCATTTGAGTTTTTACTCTTGTTTGTTTAGAACCTAACAATCCGCAGGGGAGTgtatctctctcgctcgctctctctgataTCATGATGTCAGCAGTACTAACTGAAGAGTGATGTAAAGCCCAACCTGGTACAGCCTAATACTTGTGTTCTGTGGGATGGCCTCCACCTCAGTAGTCCCAGCACCCGATATCGTCACACCATAAGC
>TU2102671
GATTAGATCTATAAAGTGCTTTAATTTCTAAATGGCAAATCAGATATGTactgtatgaaaataccctcaaataaagtgacattctgtactgtcaccttatataaaatatatacatgCAACAGCATGTGTACACGTACATACTGTTGGATTCTAgcttgaaatatacttattcatgttgCCATACTAGAACTTATTGGTTACTTTGCATGTATAATGAAGGTATATGTTGGGGTCAATGGAGGGTGGATAATAGCTATGTGTATGGAAAGTAACTGAGTGAGACAATGGGGGGAGGCAGGGAGTATTTGTTACTGTTAAATCTCATGGATCCTATGGAGGGAGGCAAAGGGCAACAGTCTGGTTTCAGTCACTGATAAAGTAGGACAGCCGTGGATTAGGGAGGAGCGAGGAATTCAGcctgaggtcaggtcagatgaagtgagaaggAACAGTCCTATCCCACACACATTTCCACACCCACGAAGGTTCTAGCCTGAGGCAGGGCCATGACTACACCAGTAAGAGGAAACCAATTAAGTTCCTGACTTAGCAACAGAGACGTATTGGCTGTCTAGATGGGCAAGGACTTGACTCCGCCTAGTAGGAGGGTATAAATATATGTGCTTGTGTAaacatgtctttgtctttgtacctgtttgacccagtgggtgaataaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2102672 False 688 lncRNA 0.46 1 16650832 16651519
TU2102671 True 679 lncRNA 0.42 1 16651056 16651734

Neighbor

gene id symbol gene type direction distance location
LOC118943947 NA coding downstream 4400 16646380 ~ 16646432 (-)
trnai-uau-47 NA coding downstream 274859 16375880 ~ 16375973 (-)
LOC110502333 LOC102778633 coding downstream 781781 15865071 ~ 15869051 (-)
LOC110502332 mcfd2 coding downstream 845855 15799370 ~ 15804977 (-)
LOC110502330 LOC106605086 coding downstream 945413 15702242 ~ 15705419 (-)
LOC110502345 eml4 coding upstream 21675 16673409 ~ 16764042 (-)
LOC110502346 pkdcc coding upstream 239620 16891354 ~ 16923979 (-)
LOC110502348 LOC106605759 coding upstream 376015 17027749 ~ 17096659 (-)
LOC110503085 NA coding upstream 415544 17067278 ~ 17077857 (-)
LOC110502353 LOC106605805 coding upstream 768589 17420323 ~ 17425430 (-)
G1836140 NA non-coding downstream 2227 16648090 ~ 16648605 (-)
G1836139 NA non-coding downstream 2793 16647815 ~ 16648039 (-)
G1836048 NA non-coding downstream 16688 16633880 ~ 16634144 (-)
G1835943 NA non-coding downstream 89858 16560767 ~ 16560974 (-)
G1835870 NA non-coding downstream 204131 16441104 ~ 16446701 (-)
G1836143 NA non-coding upstream 3064 16654798 ~ 16655733 (-)
G1836141 NA non-coding upstream 6866 16658600 ~ 16659427 (-)
G1836149 NA non-coding upstream 16413 16668147 ~ 16668437 (-)
G1836147 NA non-coding upstream 17306 16669040 ~ 16672709 (-)
G1835092 NA other downstream 903097 15745638 ~ 15747735 (-)
tmem254 cj057 other downstream 979652 15666203 ~ 15671223 (-)
G1834927 NA other downstream 1150571 15498754 ~ 15500261 (-)
G1834810 NA other downstream 1483913 15166209 ~ 15166919 (-)
G1833570 NA other downstream 2129903 14520349 ~ 14520929 (-)
G1837980 NA other upstream 1058038 17709772 ~ 17719204 (-)
LOC110502361 LOC106605890 other upstream 1073529 17725263 ~ 17781515 (-)
LOC110502394 LOC106606249 other upstream 2197963 18849389 ~ 18854222 (-)
si:dkey-51a16.9 LOC106576688 other upstream 2460308 19111958 ~ 19145332 (-)

Expression


Co-expression Network