Gene
RNA
| Item | Value |
|---|---|
| gene id | G1836141 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 16658600 ~ 16659427 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| E3 ubiquitin-protein ligase TRIM21-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2102670 | True | 488 | lncRNA | 0.48 | 2 | 16658600 | 16659427 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943947 | NA | coding | downstream | 12168 | 16646380 ~ 16646432 (-) |
| trnai-uau-47 | NA | coding | downstream | 282627 | 16375880 ~ 16375973 (-) |
| LOC110502333 | LOC102778633 | coding | downstream | 789549 | 15865071 ~ 15869051 (-) |
| LOC110502332 | mcfd2 | coding | downstream | 853623 | 15799370 ~ 15804977 (-) |
| LOC110502330 | LOC106605086 | coding | downstream | 953181 | 15702242 ~ 15705419 (-) |
| LOC110502345 | eml4 | coding | upstream | 13982 | 16673409 ~ 16764042 (-) |
| LOC110502346 | pkdcc | coding | upstream | 231927 | 16891354 ~ 16923979 (-) |
| LOC110502348 | LOC106605759 | coding | upstream | 368322 | 17027749 ~ 17096659 (-) |
| LOC110503085 | NA | coding | upstream | 407851 | 17067278 ~ 17077857 (-) |
| LOC110502353 | LOC106605805 | coding | upstream | 760896 | 17420323 ~ 17425430 (-) |
| G1836143 | NA | non-coding | downstream | 2867 | 16654798 ~ 16655733 (-) |
| G1836142 | NA | non-coding | downstream | 6866 | 16650832 ~ 16651734 (-) |
| G1836140 | NA | non-coding | downstream | 9995 | 16648090 ~ 16648605 (-) |
| G1836139 | NA | non-coding | downstream | 10561 | 16647815 ~ 16648039 (-) |
| G1836048 | NA | non-coding | downstream | 24456 | 16633880 ~ 16634144 (-) |
| G1836149 | NA | non-coding | upstream | 8720 | 16668147 ~ 16668437 (-) |
| G1836147 | NA | non-coding | upstream | 9613 | 16669040 ~ 16672709 (-) |
| G1836219 | NA | non-coding | upstream | 137469 | 16796896 ~ 16797106 (-) |
| G1836265 | NA | non-coding | upstream | 144515 | 16803942 ~ 16804152 (-) |
| G1835092 | NA | other | downstream | 910865 | 15745638 ~ 15747735 (-) |
| tmem254 | cj057 | other | downstream | 987420 | 15666203 ~ 15671223 (-) |
| G1834927 | NA | other | downstream | 1158339 | 15498754 ~ 15500261 (-) |
| G1834810 | NA | other | downstream | 1491681 | 15166209 ~ 15166919 (-) |
| G1833570 | NA | other | downstream | 2137671 | 14520349 ~ 14520929 (-) |
| G1837980 | NA | other | upstream | 1050345 | 17709772 ~ 17719204 (-) |
| LOC110502361 | LOC106605890 | other | upstream | 1065836 | 17725263 ~ 17781515 (-) |
| LOC110502394 | LOC106606249 | other | upstream | 2190270 | 18849389 ~ 18854222 (-) |
| si:dkey-51a16.9 | LOC106576688 | other | upstream | 2452615 | 19111958 ~ 19145332 (-) |
