G1836147


Basic Information

Item Value
gene id G1836147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 16669040 ~ 16672709 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2102679
CGCATTTCAGACCCGAGATTAGTGGATTAAAAACTGTCCTCTGACTTTATTTCATGTGACTTTACACCATCGAAGTTGTGTATATTGCACTTTTTTACGAACACATTAATGAGTCACCAAATGCTAAACAGCAGATCGGACCACAAGCCCTCAAGTTACTGTTGGCTGATTTCACAGATCCTTTCTCCATCTGTCTTGCTCTCCTTCCTCTGCCTGCCCGTGGAGTTATTGGCCCCTGGAGTCAGTTCTAGGCATTGCAGCGGTCCTGATAGCAACACGTCCAGCCCAGGCGAGAGCAGAACTCAAGCCTAGCACAGCCCTTCTCCCCAGAACCTGTAGAGGAGACCTCCTGATGTAGCAGGCCTGCTGTGTTTTGCTTGAGCACTGTAGGAGCTGGTTCCTCAGCATCAGGAAGTCCTCACCGTAACACTCAATGTTGTAGTCCGCTATGGCAAGGGAAGGAAGAGATGTTCAGAGTTCATTCTCATTAGTGAATACAGTACGTTTAGGCTGGTTCAAAGATCACAAGAGACATGGTTACGTCACAACCTACATAAGGACTTGAATTTGATCTGAGAAAGTATTACAATCTCATGCCAGCACTGTTATGAATGATGCAGAGCGGGAATTCAGTAATGTGAGTGTGCGTGCGCTATACTTGCATTTGTGTGTGCGAGCGACTGTGTGTACGTGAGTTTTTGGGTTTGACCTCAAAATACCCAAGAAAGGAGATCTAAGGGAGTGTAAAAACTACCTCAGGATAATGTTGGTTAACACCAGGGAAAGTGTTCAATCACGTCATCCTgtataagttcaggagtaaaaaaaatgtatttaacaagtcacataataaattgcatggacttaTTCTGTGCGCAATAATAGAGTTTAACATgaattttgaatgactacctcctctctgtaccctacatatacaattatctgtaagatccctcagccgagcagtgaatttgaaacaccgattcaaccacaatggttcagggagtttttccaatacctagcaaagaagggcacctagacatcgaatatccctttgagcattgtgttaaataaaaggttagatcttttcattgtattttttaaaagttattatttacactttggatggtgtatcaatacactcagtcgcaacaaagatacaggcaactcagttgccggagaggaaggaaaccgctcagggatttcaacatgagACCAATGGTTCCTCAGTGAcgtagttacagtttttacttaaattgtcttgaaaatctatggcaagacttgaaaatggccatctagcaatgaccaacaaccaacttgaccagtgtttgaagaatttttaaaTGCAAATAATGTACAATCCAGGTATGCAAAGATTTACTCAGAAaatctcacagctgtaatcgcggACAAAGTTATTTGAACGTATTGACTCGGATGTCAAAATGTATGTAAATGAGACATTTAATTTTCAGTAAATTTGAAAAcattggggtattgtgtagatgtgtgaaaaaatatatatagtccaTTTTGAATTCggactgtaacaacaaaatgggaaataagtcaaggggtatgaatactttctgaaggcactgcaggtCCGACAGGCATGCTTACCGGATCATTCAAGAAACAACAGGCACACAGTGAACCGGAAGATCTGGACTTTGCGGATGACCTTGCTCCactgtctcacaaacacacaaaaatgcAGGACAAGTCTCGGCTCTTGCAAGCAACATAAGCTTAGATCGGACTTCAAATCAACATCAACTGATGAAGAATGTGAAAGCAGGAATCGGTAAAGCCAGAACAGCATAAAAGCTAAACCAAAGACTGAGATTTCTAATCAATGTGAAGGCCATCTTCCTTAACGGGTCTAAGACATGGAGAACCACCAGCAGCATGCTCTGTTAAAAAGTACAAACATTCATCAACCGATGTCTCAGACGCTTACTTGGAATTCATTGGACATATACCATCAGAAACATCTGACTGTGGGAGATCACAAAACAAGTACCTATTGAAGCACAAATGAAGAGGAGGAAGTGGTGCTGGTTAGGCCACACTGGTTAGGCTACACTAAGAAGAAACGTGCATCACCAAACTAGACTCTTACCTTTAGCCCACAAGTTAAACGCAAGAGAGAAAGGCCCATGACCACTTTCATCTACACCTCCACCTGCATCTTCACAGAGCAAGAAATTAAGACTGAGCCACTGATATGGCAACAATAACAACTGGCAAAGGACAGAAAGGGTTGGAAGCAGCTCGGCAATGACCTATGTTCCGCAAGGAACTTAAAAGCACTAGCCAAGGTAAGTAAGTGTGACTTACCTGTGCACAGAGGGAGCAGCAGAAGCAGGACCAGGTAGGCTCTCATTGTTGCTCTCAGCAGAGGAGTTCTCTTAGCAATAGAGAAGTCTTGAGGTTGAAAGTCTATGACAGGTCGAGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106605369 isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2102679 True 2461 lncRNA 0.42 2 16669040 16672709

Neighbor

gene id symbol gene type direction distance location
LOC118943947 NA coding downstream 22608 16646380 ~ 16646432 (-)
trnai-uau-47 NA coding downstream 293067 16375880 ~ 16375973 (-)
LOC110502333 LOC102778633 coding downstream 799989 15865071 ~ 15869051 (-)
LOC110502332 mcfd2 coding downstream 864063 15799370 ~ 15804977 (-)
LOC110502330 LOC106605086 coding downstream 963621 15702242 ~ 15705419 (-)
LOC110502345 eml4 coding upstream 700 16673409 ~ 16764042 (-)
LOC110502346 pkdcc coding upstream 218645 16891354 ~ 16923979 (-)
LOC110502348 LOC106605759 coding upstream 355040 17027749 ~ 17096659 (-)
LOC110503085 NA coding upstream 394569 17067278 ~ 17077857 (-)
LOC110502353 LOC106605805 coding upstream 747614 17420323 ~ 17425430 (-)
G1836149 NA non-coding downstream 603 16668147 ~ 16668437 (-)
G1836141 NA non-coding downstream 9613 16658600 ~ 16659427 (-)
G1836143 NA non-coding downstream 13307 16654798 ~ 16655733 (-)
G1836142 NA non-coding downstream 17306 16650832 ~ 16651734 (-)
G1836140 NA non-coding downstream 20435 16648090 ~ 16648605 (-)
G1836219 NA non-coding upstream 124187 16796896 ~ 16797106 (-)
G1836265 NA non-coding upstream 131233 16803942 ~ 16804152 (-)
G1836269 NA non-coding upstream 135567 16808276 ~ 16808576 (-)
G1836272 LOC100136775 non-coding upstream 167861 16840570 ~ 16848207 (-)
G1835092 NA other downstream 921305 15745638 ~ 15747735 (-)
tmem254 cj057 other downstream 997860 15666203 ~ 15671223 (-)
G1834927 NA other downstream 1168779 15498754 ~ 15500261 (-)
G1834810 NA other downstream 1502121 15166209 ~ 15166919 (-)
G1833570 NA other downstream 2148111 14520349 ~ 14520929 (-)
G1837980 NA other upstream 1037063 17709772 ~ 17719204 (-)
LOC110502361 LOC106605890 other upstream 1052554 17725263 ~ 17781515 (-)
LOC110502394 LOC106606249 other upstream 2176988 18849389 ~ 18854222 (-)
si:dkey-51a16.9 LOC106576688 other upstream 2439333 19111958 ~ 19145332 (-)

Expression


Co-expression Network